Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 U2.1-201ENST00000618978 145 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 SCARNA4-201ENST00000629045 128 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.51□□□□□ -1.85
RTF1Q92541 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.5□□□□□ -1.85
RTF1Q92541 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RTF1Q92541 Y_RNA.106-201ENST00000363189 100 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 Y_RNA.152-201ENST00000363578 100 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 Y_RNA.176-201ENST00000363815 109 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 RNU6-1286P-201ENST00000383871 107 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 RNU6-968P-201ENST00000384076 107 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 MIR568-201ENST00000385036 95 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AL512633.1-201ENST00000399931 655 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 MIR190B-201ENST00000401119 79 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 MIR1252-201ENST00000408861 65 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 RNA5SP390-201ENST00000410191 113 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 Y_RNA.592-201ENST00000410274 109 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 RNU6-1077P-201ENST00000410506 102 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AL358453.1-201ENST00000422522 250 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.5□□□□□ -1.85
RTF1Q92541 AC012308.1-201ENST00000451232 178 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.5□□□□□ -1.85
RTF1Q92541 AP001025.1-201ENST00000486139 332 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 RPL22P13-201ENST00000493291 347 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.5□□□□□ -1.85
RTF1Q92541 SNORA31.26-201ENST00000517250 137 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AC091144.1-201ENST00000519573 138 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.5□□□□□ -1.85
RTF1Q92541 AC040926.1-201ENST00000530195 238 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 RPL23AP78-201ENST00000599928 470 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.5□□□□□ -1.85
RTF1Q92541 AC004944.1-201ENST00000517807 3059 ntBASIC3.5□□□□□ -1.85
RTF1Q92541 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.5□□□□□ -1.85
RTF1Q92541 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RTF1Q92541 AC233263.6-201ENST00000631132 1963 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 Y_RNA.47-201ENST00000362697 108 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 RNY3P11-201ENST00000364153 102 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 RNU6-1141P-201ENST00000364520 107 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 RNU6-450P-201ENST00000364654 107 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 SNORA63.7-201ENST00000365579 123 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 Y_RNA.405-201ENST00000383979 100 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 Y_RNA.451-201ENST00000384200 100 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 Y_RNA.524-201ENST00000384564 100 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 Y_RNA.561-201ENST00000384694 100 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 MIR1302-3-201ENST00000408128 138 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.49□□□□□ -1.85
RTF1Q92541 IPO7P1-201ENST00000442031 636 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 RNU7-169P-201ENST00000459456 61 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.49□□□□□ -1.85
RTF1Q92541 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.49□□□□□ -1.85
RTF1Q92541 AC104564.1-201ENST00000493028 407 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 Y_RNA.715-201ENST00000517082 110 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.49□□□□□ -1.85
RTF1Q92541 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.49□□□□□ -1.85
RTF1Q92541 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 COX6CP5-201ENST00000527162 228 ntBASIC3.49□□□□□ -1.85
RTF1Q92541 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.49□□□□□ -1.85
RTF1Q92541 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTF1Q92541 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.49□□□□□ -1.85
RTF1Q92541 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTF1Q92541 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTF1Q92541 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RTF1Q92541 RNU6-874P-201ENST00000362390 105 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 RNU6-142P-201ENST00000384019 107 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 Y_RNA.452-201ENST00000384202 108 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 RNU6-622P-201ENST00000384272 103 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 MIR628-201ENST00000385229 95 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 MTCO3P29-201ENST00000432119 779 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.48□□□□□ -1.85
RTF1Q92541 MTCO3P8-201ENST00000453691 755 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 snoU13.30-201ENST00000458951 104 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 RPL23AP75-201ENST00000491601 451 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 Y_RNA.706-201ENST00000516933 99 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 MRPS36P4-201ENST00000534436 298 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.48□□□□□ -1.85
RTF1Q92541 MIR4503-201ENST00000582187 83 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 RPL23AP88-201ENST00000605759 454 ntBASIC3.48□□□□□ -1.85
RTF1Q92541 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.48□□□□□ -1.85
RTF1Q92541 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTF1Q92541 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTF1Q92541 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTF1Q92541 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.47□□□□□ -1.85
RTF1Q92541 SNORD115-32-201ENST00000364079 82 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 RNU4-50P-201ENST00000364361 141 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 RNU6-1222P-201ENST00000384615 107 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 Y_RNA.551-201ENST00000384661 102 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 Y_RNA.574-201ENST00000384766 95 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 MIR544A-201ENST00000384855 91 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 RNA5SP252-201ENST00000391131 119 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 RN7SKP61-201ENST00000410642 295 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 AC096649.2-201ENST00000416186 393 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 PTGES3P4-201ENST00000426243 356 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 AC073910.1-201ENST00000445047 438 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 OR2AQ1P-201ENST00000451972 200 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 AC010655.3-201ENST00000478818 450 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 AC091874.1-201ENST00000511402 339 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 RNU6-635P-201ENST00000516651 102 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 MIR2355-201ENST00000517199 87 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 AC004817.2-201ENST00000561794 651 ntBASIC3.47□□□□□ -1.85
RTF1Q92541 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.47□□□□□ -1.85
RTF1Q92541 AC090897.2-201ENST00000581715 130 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms