Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 MIR1283-2-201ENST00000408621 87 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 MTCO1P21-201ENST00000416634 589 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 SNRPEP10-201ENST00000420249 274 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 NDUFA5P4-201ENST00000436704 385 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC009541.1-201ENST00000438279 2662 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 HMGN2P26-201ENST00000463169 339 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC083904.1-201ENST00000487828 231 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 RPL39P5-202ENST00000512505 151 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC008549.1-201ENST00000512900 643 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC104576.1-201ENST00000524225 88 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 TPRKBP2-201ENST00000565969 475 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 CPDP1-201ENST00000579660 283 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AL109918.3-201ENST00000603072 338 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
TRAF3IP1Q8TDR0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 RNU6-254P-201ENST00000363377 107 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 RNY4P14-201ENST00000363656 96 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 RNU6-234P-201ENST00000365229 104 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 Y_RNA.402-201ENST00000383972 102 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 MIR450B-201ENST00000401182 78 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AL357139.1-201ENST00000407792 426 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AC012306.1-201ENST00000423267 114 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AC096920.1-201ENST00000423991 241 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AL589823.1-201ENST00000429577 183 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 MRPS10P2-201ENST00000431226 381 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 RPL23AP3-201ENST00000453844 468 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 HMGB3P17-201ENST00000504195 649 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 RPL17P51-201ENST00000605218 238 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 AC104458.1-201ENST00000608243 463 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 U4.5-201ENST00000617137 123 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 ZNF702P-202ENST00000434269 1966 ntBASIC2.03□□□□□ -2.08
TRAF3IP1Q8TDR0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.9-201ENST00000362354 101 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-743P-201ENST00000364151 106 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 TRBVA-201ENST00000498804 316 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 AC087441.2-201ENST00000529141 262 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 AC016957.1-201ENST00000534895 309 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 AC009994.1-201ENST00000606889 253 ntBASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
TRAF3IP1Q8TDR0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.3-201ENST00000362331 103 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU1-58P-201ENST00000362413 163 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 SNORD113-7-201ENST00000363762 77 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-1317P-201ENST00000364582 104 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 SNORA36A-201ENST00000384221 132 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.530-201ENST00000384587 101 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.615-201ENST00000410769 117 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 RN7SKP192-201ENST00000411291 327 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AL030996.1-201ENST00000411430 235 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AL645568.3-201ENST00000433683 316 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AL353689.1-201ENST00000438895 199 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 HMGN2P18-201ENST00000450680 270 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 MTCO1P29-201ENST00000496868 288 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AC005741.1-201ENST00000511094 432 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-991P-201ENST00000516168 107 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-1332P-201ENST00000516666 104 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 HSPE1P18-201ENST00000517602 280 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 MTND1P5-201ENST00000517906 940 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 AC109446.1-201ENST00000566172 220 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
TRAF3IP1Q8TDR0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms