Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 U3.13-201ENST00000364804 214 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 Y_RNA.574-201ENST00000384766 95 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 IPO7P1-201ENST00000442031 636 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 OSTCP8-201ENST00000445117 448 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 FCF1P4-201ENST00000448326 183 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 U8.22-201ENST00000459141 133 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 RNU7-87P-201ENST00000459343 62 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 RN7SL20P-201ENST00000488827 297 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 RPS27P26-201ENST00000494583 239 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 MRPS35P2-201ENST00000508242 191 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 AP002770.2-201ENST00000543613 532 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 AC105137.2-201ENST00000569073 466 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 MIR5195-201ENST00000583555 115 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 AL078605.1-201ENST00000603529 500 ntBASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.16□□□□□ -1.9
CCHCR1Q8TD31 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CCHCR1Q8TD31 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCHCR1Q8TD31 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.15□□□□□ -1.9
CCHCR1Q8TD31 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNU6-529P-201ENST00000363383 104 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNU6-137P-201ENST00000363680 108 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 SET-203ENST00000372688 801 ntTSL 2 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNU6-708P-201ENST00000384217 107 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 SNORA7.4-201ENST00000384249 137 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNU6-574P-201ENST00000384265 107 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 SNORA51.11-201ENST00000384442 131 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 MIR767-201ENST00000390228 109 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNA5SP213-201ENST00000391031 106 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNU1-139P-201ENST00000391307 165 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RPS26P42-201ENST00000413485 326 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RNU6-635P-201ENST00000516651 102 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 AC034114.1-201ENST00000520293 285 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 RPS29P30-201ENST00000600975 111 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 MAPK10-266ENST00000641066 6555 ntBASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.15□□□□□ -1.91
CCHCR1Q8TD31 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.40-201ENST00000362645 93 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 SNORD114-19-201ENST00000363072 75 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 SNORD115-8-201ENST00000363856 82 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.210-201ENST00000364161 110 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 SNORD115-38-201ENST00000365037 82 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 Y_RNA.452-201ENST00000384202 108 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RNY3P4-201ENST00000384428 101 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RPL21P1-201ENST00000399532 476 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RN7SKP220-201ENST00000410611 288 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AL590135.1-201ENST00000422215 156 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC012306.1-201ENST00000423267 114 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC019205.3-201ENST00000424573 156 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC009414.1-201ENST00000427200 443 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC016700.2-201ENST00000446011 156 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AP001324.2-201ENST00000461163 319 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC090525.1-201ENST00000479116 478 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RN7SL504P-201ENST00000494496 287 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AIG1P1-201ENST00000503376 148 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 SNORA31.16-201ENST00000516773 139 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RNU6-826P-201ENST00000516827 104 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 RN7SKP272-201ENST00000516988 232 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC027288.2-201ENST00000553028 243 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 MIR3136-201ENST00000583498 78 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 AL390123.1-201ENST00000603216 237 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 Z75746.1-201ENST00000440243 2080 ntBASIC3.14□□□□□ -1.91
CCHCR1Q8TD31 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AL109809.4-201ENST00000603520 2185 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RNU6-222P-201ENST00000362438 107 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RNU1-76P-201ENST00000362903 159 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 SNORA70.4-201ENST00000365509 134 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RNU6-26P-201ENST00000383985 107 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 MIR181B1-201ENST00000385240 110 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RNA5SP354-201ENST00000391247 136 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 EIF1P2-201ENST00000428233 350 ntBASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.13□□□□□ -1.91
CCHCR1Q8TD31 UBBP3-201ENST00000445497 241 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms