Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MTND4P29-201ENST00000503122 1372 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AIG1P1-201ENST00000503376 148 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.55□□□□□ -2
BEST2Q8NFU1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AC109329.1-201ENST00000518744 317 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.55□□□□□ -2
BEST2Q8NFU1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.55□□□□□ -2
BEST2Q8NFU1 AC007375.1-201ENST00000554513 578 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.55□□□□□ -2
BEST2Q8NFU1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.55□□□□□ -2
BEST2Q8NFU1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.55□□□□□ -2
BEST2Q8NFU1 MIR4273-201ENST00000582824 84 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.55□□□□□ -2
BEST2Q8NFU1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
BEST2Q8NFU1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.54□□□□□ -2
BEST2Q8NFU1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 RNU4-79P-201ENST00000362764 141 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 RNU6-1188P-201ENST00000363795 107 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 RNU6-461P-201ENST00000364195 107 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 Y_RNA.259-201ENST00000364619 101 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
BEST2Q8NFU1 Y_RNA.509-201ENST00000384506 99 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.54□□□□□ -2
BEST2Q8NFU1 Z98742.3-201ENST00000418637 326 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 EIF4EP4-201ENST00000424916 578 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 MICF-203ENST00000432679 129 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 AC244670.1-201ENST00000436879 112 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.54□□□□□ -2
BEST2Q8NFU1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.54□□□□□ -2
BEST2Q8NFU1 AC073901.1-201ENST00000462471 408 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 AC140059.1-201ENST00000489238 361 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 RNU2-53P-201ENST00000516257 147 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 SCARNA3-201ENST00000517097 143 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.54□□□□□ -2
BEST2Q8NFU1 AL356157.2-201ENST00000605122 111 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 SNORA43.4-201ENST00000629559 138 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 AC026241.1-201ENST00000517873 2142 ntBASIC2.54□□□□□ -2
BEST2Q8NFU1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
BEST2Q8NFU1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
BEST2Q8NFU1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
BEST2Q8NFU1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.53□□□□□ -2
BEST2Q8NFU1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BEST2Q8NFU1 Y_RNA.48-201ENST00000362710 103 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 RNU6-655P-201ENST00000362858 107 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 SNORD50.1-201ENST00000362987 71 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 RNU6-784P-201ENST00000384330 106 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 SNORD116-29-201ENST00000384516 83 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AL591034.2-201ENST00000402839 359 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 MIR1261-201ENST00000408659 82 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 RNU6-174P-201ENST00000410406 106 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 RN7SKP61-201ENST00000410642 295 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 CYCSP48-201ENST00000417124 323 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AL356320.1-201ENST00000429616 163 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.53□□□□□ -2
BEST2Q8NFU1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.53□□□□□ -2
BEST2Q8NFU1 AL121890.1-201ENST00000435457 205 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 GPM6BP3-201ENST00000442797 145 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AL121594.1-201ENST00000475906 575 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.53□□□□□ -2
BEST2Q8NFU1 AC016632.1-201ENST00000503994 196 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 RNA5SP281-201ENST00000516504 135 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 SNORA31.16-201ENST00000516773 139 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 MRPS36P4-201ENST00000534436 298 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AC090616.3-201ENST00000582184 217 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 MIR5690-201ENST00000583739 73 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 HMGB1P24-202ENST00000615653 685 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 AC098657.3-201ENST00000620434 263 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 MIR7157-201ENST00000635801 60 ntBASIC2.53□□□□□ -2
BEST2Q8NFU1 MTND5P9-201ENST00000503854 1755 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 SNORA36A-201ENST00000384221 132 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RNU6-310P-201ENST00000384655 107 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RNU6-331P-201ENST00000384724 107 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RNY4P36-201ENST00000391116 96 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 Y_RNA.646-201ENST00000410980 101 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AL135786.1-201ENST00000415892 214 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AIMP1P2-201ENST00000425294 312 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AC079354.2-201ENST00000453523 154 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RPL30P15-201ENST00000457129 321 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 SNORD19B-201ENST00000459623 84 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RPL30P1-201ENST00000488676 339 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AC104564.1-201ENST00000493028 407 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 ANXA2P1-201ENST00000505539 926 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RNA5SP384-201ENST00000516615 116 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 Y_RNA.718-201ENST00000517110 102 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AC115990.1-201ENST00000526957 301 ntBASIC2.52□□□□□ -2.01
BEST2Q8NFU1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms