Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
RTL9Q8NET4 AC012467.1-201ENST00000607740 256 ntBASIC0.38□□□□□ -2.35
RTL9Q8NET4 AC023934.1-201ENST00000574529 2389 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 RNU6-1123P-201ENST00000362347 106 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 RNU6-110P-201ENST00000384508 104 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AL031577.2-201ENST00000404133 280 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 RPS3AP37-201ENST00000419176 745 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 RAB28P5-201ENST00000427490 651 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 CETN4P-201ENST00000432407 469 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.37□□□□□ -2.35
RTL9Q8NET4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.37□□□□□ -2.35
RTL9Q8NET4 RNU7-34P-201ENST00000459394 64 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AC048334.1-201ENST00000477975 159 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.37□□□□□ -2.35
RTL9Q8NET4 RNU6-1041P-201ENST00000516254 102 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AL590705.4-201ENST00000532209 134 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.37□□□□□ -2.35
RTL9Q8NET4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 BNIP3P26-201ENST00000600827 554 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AL034555.1-201ENST00000604816 211 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
RTL9Q8NET4 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 Y_RNA.311-201ENST00000365068 96 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 RNU6-224P-201ENST00000384055 107 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 RNU2-62P-201ENST00000410868 191 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.36□□□□□ -2.35
RTL9Q8NET4 MTND4P3-201ENST00000417829 541 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 MTND4P20-201ENST00000424125 869 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 RPL39P38-201ENST00000467018 153 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 AC022447.4-201ENST00000504053 364 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.36□□□□□ -2.35
RTL9Q8NET4 AP003327.1-201ENST00000529684 127 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.36□□□□□ -2.35
RTL9Q8NET4 SNORA59B-202ENST00000578183 701 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 AC105148.1-201ENST00000604961 409 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 AL158163.2-201ENST00000619110 700 ntBASIC0.36□□□□□ -2.35
RTL9Q8NET4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RTL9Q8NET4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RTL9Q8NET4 RNY3P13-201ENST00000365542 102 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 RNU5E-6P-201ENST00000365574 115 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 SNORA40.2-201ENST00000390847 128 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.35□□□□□ -2.35
RTL9Q8NET4 RPL23AP30-201ENST00000432419 501 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 MTCYBP1-201ENST00000454315 1119 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 MTCO3P9-201ENST00000506989 781 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.35□□□□□ -2.35
RTL9Q8NET4 AC113347.3-201ENST00000509113 148 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 RNU6-1028P-201ENST00000517164 93 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.35□□□□□ -2.35
RTL9Q8NET4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.35□□□□□ -2.35
RTL9Q8NET4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
RTL9Q8NET4 AC026585.1-201ENST00000619582 524 ntBASIC0.35□□□□□ -2.35
RTL9Q8NET4 RNU6-527P-201ENST00000363425 104 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 RNU6-142P-201ENST00000384019 107 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 RNU6-1179P-201ENST00000384667 107 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.35
RTL9Q8NET4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AC000111.3-201ENST00000433478 193 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.34□□□□□ -2.35
RTL9Q8NET4 RNU7-14P-201ENST00000459331 62 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 SNORD79.1-201ENST00000516069 84 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AC036111.3-201ENST00000526389 112 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.34□□□□□ -2.35
RTL9Q8NET4 AP001542.1-201ENST00000591314 200 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AC110760.3-201ENST00000598794 467 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AC245297.2-201ENST00000610119 565 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 RMST_7.1-201ENST00000621935 268 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 AC106858.1-201ENST00000637497 429 ntBASIC0.34□□□□□ -2.35
RTL9Q8NET4 RNU6-462P-201ENST00000362659 105 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 RNU6-1285P-201ENST00000363480 105 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 SNORD18A-201ENST00000363753 72 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 RNU6-960P-201ENST00000364056 120 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 RNU6-384P-201ENST00000364900 104 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 SNORD31B-201ENST00000364977 69 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.33□□□□□ -2.36
RTL9Q8NET4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
RTL9Q8NET4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.33□□□□□ -2.36
RTL9Q8NET4 RNA5SP216-201ENST00000516111 123 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 RNA5SP255-201ENST00000516370 107 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 AC026616.1-201ENST00000523157 525 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 MIR548AC-201ENST00000585049 88 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 AC104073.3-201ENST00000610942 955 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 AC008147.4-201ENST00000617570 1204 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 AC126177.8-201ENST00000618339 1015 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.33□□□□□ -2.36
RTL9Q8NET4 SNORD98-201ENST00000636377 67 ntBASIC0.33□□□□□ -2.36
RTL9Q8NET4 USP9YP21-201ENST00000420603 432 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC011233.1-201ENST00000422812 283 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC023050.2-201ENST00000544968 387 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 AC091489.2-201ENST00000566263 604 ntBASIC0.32□□□□□ -2.36
RTL9Q8NET4 MIR3136-201ENST00000583498 78 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms