Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC078795.3-201ENST00000602913 472 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 HULC.1-201ENST00000612720 240 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC022079.1-201ENST00000621546 602 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 MIR7843-201ENST00000622274 79 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 SNORA43.4-201ENST00000629559 138 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 U8.1-201ENST00000362843 134 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 Y_RNA.77-201ENST00000362962 107 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 RNA5SP493-201ENST00000364115 91 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 Y_RNA.359-201ENST00000365498 102 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 snoU13.23-201ENST00000458863 104 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 RNU7-63P-201ENST00000459054 62 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC007547.1-201ENST00000462177 490 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC108078.1-201ENST00000508073 725 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC010486.3-201ENST00000511602 785 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 RNVU1-2-201ENST00000516326 135 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 HSPE1P4-201ENST00000550617 308 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC010900.2-201ENST00000604508 210 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AP001836.1-201ENST00000604675 523 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 AL356157.2-201ENST00000605122 111 ntBASIC1.59□□□□□ -2.15
CCDC65Q8IXS2 ELL2P3-201ENST00000457883 1602 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 DEFB108C-201ENST00000400154 252 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 RNU6-174P-201ENST00000410406 106 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 RNA5SP100-201ENST00000410903 110 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 RNA5SP59-201ENST00000410922 110 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 MTCO3P46-201ENST00000425787 232 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AC073464.1-201ENST00000429823 534 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AL163973.1-201ENST00000484753 577 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AC108210.2-201ENST00000503681 201 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AC114801.2-201ENST00000503825 781 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 HMGB1P29-201ENST00000505659 499 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AC010424.1-201ENST00000506336 297 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AK3P2-201ENST00000507976 429 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 ATP5EP1-201ENST00000510257 156 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AC026407.1-201ENST00000518369 204 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AP005136.1-201ENST00000579765 429 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 MIR3941-201ENST00000582572 103 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AP000654.2-201ENST00000605633 586 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 RNU6-85P-201ENST00000605989 107 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AL022345.1-201ENST00000607292 135 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 PCGEM1.1-201ENST00000613431 131 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AL354950.2-201ENST00000617939 290 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CCDC65Q8IXS2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 RNU6-338P-201ENST00000383888 105 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 RNU6-26P-201ENST00000383985 107 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 SNORA36A-201ENST00000384221 132 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 SNORA12.2-201ENST00000391040 156 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AF228730.1-201ENST00000397972 663 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AL590556.1-201ENST00000423231 483 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 VN1R108P-201ENST00000431580 830 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AL606489.2-201ENST00000433886 234 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AL035666.1-201ENST00000446195 348 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 MTCO2P18-201ENST00000457151 658 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC079140.5-201ENST00000507882 310 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC015712.3-201ENST00000559380 164 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC006362.1-201ENST00000567392 174 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC087683.1-201ENST00000591187 441 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AC025754.2-201ENST00000606491 432 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 U2.17-201ENST00000611454 95 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 AL590240.4-201ENST00000616908 390 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 uc_338.34-201ENST00000617467 174 ntBASIC1.57□□□□□ -2.16
CCDC65Q8IXS2 Y_RNA.255-201ENST00000364581 97 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 RNU6-378P-201ENST00000384324 107 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 SNORD73A-201ENST00000386062 65 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 RNA5SP213-201ENST00000391031 106 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC002486.1-201ENST00000435098 391 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 MTCO2P16-201ENST00000436962 677 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC132942.1-201ENST00000486753 483 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.56□□□□□ -2.16
CCDC65Q8IXS2 SNORA40.12-201ENST00000516329 111 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms