Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 RPS15AP11-201ENST00000594193 385 ntBASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 AC016925.2-201ENST00000605108 242 ntBASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 PART1_1.1-201ENST00000611761 217 ntBASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 AC024581.2-201ENST00000619986 252 ntBASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.14□□□□□ -2.07
LRRTM1Q86UE6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 MTND5P10-201ENST00000603719 1809 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.80-201ENST00000362996 102 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.148-201ENST00000363557 117 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 U3.13-201ENST00000364804 214 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 SNORA33.2-201ENST00000365413 134 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RNU6-487P-201ENST00000365430 104 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RNU6-26P-201ENST00000383985 107 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.463-201ENST00000384271 102 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RNU6-784P-201ENST00000384330 106 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RNU6-738P-201ENST00000384531 106 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 SNORA41-201ENST00000384675 132 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RPL23AP95-201ENST00000426806 265 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RPL39P29-201ENST00000447779 157 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AC112771.1-201ENST00000463581 102 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 SMURF2P1-201ENST00000514992 481 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 RNU6-1046P-201ENST00000516538 107 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 SNRPGP18-201ENST00000553000 214 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AL442663.2-201ENST00000554385 511 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 MYL12BP1-201ENST00000569826 507 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 MIR5696-201ENST00000578474 85 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 MIR4273-201ENST00000582824 84 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 AC093732.2-201ENST00000607950 274 ntBASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRTM1Q86UE6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 SNORA48.2-201ENST00000390926 124 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 MTCO3P29-201ENST00000432119 779 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 RNU6-470P-201ENST00000515954 104 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.661-201ENST00000516003 99 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 SNORA31.16-201ENST00000516773 139 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 HSPE1P4-201ENST00000550617 308 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 MIR3200-201ENST00000580767 85 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 MIR3117-201ENST00000584034 78 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AL078605.1-201ENST00000603529 500 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 AL159153.1-201ENST00000619688 317 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 MTND5P9-201ENST00000503854 1755 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LRRTM1Q86UE6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 AC069528.2-201ENST00000624849 1991 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 AL109809.4-201ENST00000603520 2185 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 RNU6-874P-201ENST00000362390 105 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.28-201ENST00000362554 111 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 RNY3P11-201ENST00000364153 102 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 MIR487A-201ENST00000385009 80 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 RNA5SP390-201ENST00000410191 113 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 Z92545.1-201ENST00000411782 234 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 EIF4EP2-201ENST00000422816 654 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 AC018865.2-201ENST00000423631 129 ntBASIC2.11□□□□□ -2.07
LRRTM1Q86UE6 AC092427.1-202ENST00000430569 476 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms