Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.65□□□□□ -1.83
UBE3DQ7Z6J8 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AC026241.1-201ENST00000517873 2142 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AC010680.1-201ENST00000590024 3590 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 SNORD115-30-201ENST00000364117 82 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-454P-201ENST00000364292 107 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-131P-201ENST00000391144 107 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AL355497.1-201ENST00000406262 551 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 MIR1183-201ENST00000408856 89 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AIMP1P2-201ENST00000425294 312 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AL365496.1-201ENST00000426885 215 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 SEPT7P4-201ENST00000437076 306 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 Z75741.1-201ENST00000446793 314 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AL500522.2-201ENST00000448562 343 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RPS3P1-201ENST00000456781 192 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RPL31P41-201ENST00000477967 372 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 TRBV12-2-201ENST00000489763 344 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.797-201ENST00000515977 94 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RNA5SP208-201ENST00000516156 78 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RNU7-121P-201ENST00000516604 62 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 uc_338.32-201ENST00000615087 172 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AC013791.1-201ENST00000616619 62 ntBASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
UBE3DQ7Z6J8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RNU1-75P-201ENST00000347264 129 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-529P-201ENST00000363383 104 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.243-201ENST00000364481 109 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.287-201ENST00000364853 94 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RNA5SP97-201ENST00000365006 84 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 U8.12-201ENST00000384701 133 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 MIR549A-201ENST00000385268 96 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RNU2-37P-201ENST00000410695 177 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 CR769767.1-201ENST00000436337 346 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-107P-201ENST00000516643 102 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 AC022695.1-201ENST00000522089 237 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 MIR4431-201ENST00000579990 94 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 AL137849.1-201ENST00000604767 169 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 SNORA62.6-201ENST00000606322 83 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
UBE3DQ7Z6J8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-1210P-201ENST00000363775 107 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 SNORA8.3-201ENST00000384679 139 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 MIR30B-201ENST00000384850 88 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 MIR147B-201ENST00000390185 80 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-1168P-201ENST00000390831 104 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-1154P-201ENST00000391001 104 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.586-201ENST00000391146 98 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AL031003.1-201ENST00000404229 172 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 SNORA3.3-201ENST00000408712 125 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-628P-201ENST00000410675 107 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC010409.1-201ENST00000487382 476 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 MIR4744-201ENST00000581563 82 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC244505.7-201ENST00000599675 272 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC069200.1-201ENST00000609511 323 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC010329.5-201ENST00000623497 2174 ntBASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBE3DQ7Z6J8 AC010889.1-201ENST00000566193 2666 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RNU4-15P-201ENST00000362613 141 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 U3.8-201ENST00000363675 217 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-899P-201ENST00000363947 107 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-801P-201ENST00000364087 105 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RNA5SP479-201ENST00000364858 117 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.361-201ENST00000365515 120 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.368-201ENST00000365547 113 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 SNORA72.4-201ENST00000384174 132 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-750P-201ENST00000390946 107 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 AC004386.2-201ENST00000441858 148 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RPL23AP70-201ENST00000483361 460 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 SNORD116-25-201ENST00000516517 92 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms