Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MTCYBP10-201ENST00000424905 650 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 RPS15AP7-201ENST00000439294 405 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AC099799.1-201ENST00000439809 192 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 AL353752.1-201ENST00000454946 260 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AL163540.1-201ENST00000485382 386 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AC090096.1-201ENST00000489168 390 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 SCARNA3-201ENST00000517097 143 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 RN7SKP295-201ENST00000517264 153 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 MIR3199-1-201ENST00000582434 88 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 RPL12P50-201ENST00000603116 116 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AL355802.3-201ENST00000607571 545 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AC007485.1-201ENST00000616755 206 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 AL355596.1-201ENST00000565399 3996 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHFQ7M4L6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHFQ7M4L6 ZNF271P-202ENST00000465539 1970 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 RNU4-15P-201ENST00000362613 141 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 SNORD115-32-201ENST00000364079 82 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 SNORA22B-201ENST00000383876 138 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 Y_RNA.428-201ENST00000384078 102 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 U8.10-201ENST00000384260 133 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 RNY1P14-201ENST00000384426 108 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 MIR32-201ENST00000384965 70 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 MIR487A-201ENST00000385009 80 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 SNORA48.5-201ENST00000391143 135 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 MTCYBP2-201ENST00000407745 171 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 MCFD2P1-201ENST00000417812 300 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 AC092423.1-201ENST00000430165 186 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.44□□□□□ -2.02
SHFQ7M4L6 TOMM22P6-201ENST00000465035 409 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.44□□□□□ -2.02
SHFQ7M4L6 RNU7-175P-201ENST00000515915 61 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 SNORD116.3-201ENST00000517176 78 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.44□□□□□ -2.02
SHFQ7M4L6 MIR4429-201ENST00000580105 73 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 RPL30P11-203ENST00000598995 310 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.44□□□□□ -2.02
SHFQ7M4L6 AC087588.2-201ENST00000617667 426 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 MIR7157-201ENST00000635801 60 ntBASIC2.44□□□□□ -2.02
SHFQ7M4L6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHFQ7M4L6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHFQ7M4L6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHFQ7M4L6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHFQ7M4L6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHFQ7M4L6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 Y_RNA.28-201ENST00000362554 111 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 SNORA63-201ENST00000363450 132 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 Y_RNA.148-201ENST00000363557 117 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RNY3P11-201ENST00000364153 102 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 Y_RNA.314-201ENST00000365114 102 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RNU6-17P-201ENST00000384245 107 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RNU6-18P-201ENST00000384527 107 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 MIR190B-201ENST00000401119 79 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC007098.1-201ENST00000420122 367 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHFQ7M4L6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 MTND4P19-201ENST00000446659 478 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 CHEK2P4-201ENST00000450340 246 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RPS3P1-201ENST00000456781 192 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 BX510359.1-201ENST00000456973 237 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RPL7P49-201ENST00000471402 708 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC140059.1-201ENST00000489238 361 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 AL442663.2-201ENST00000554385 511 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 CYP4A27P-201ENST00000567218 190 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC022432.1-201ENST00000595739 310 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.43□□□□□ -2.02
SHFQ7M4L6 7SK.7-201ENST00000603504 247 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 AC100812.1-201ENST00000607622 580 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RMST_6.1-201ENST00000611980 203 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 MTND4P27-201ENST00000450813 1354 ntBASIC2.43□□□□□ -2.02
SHFQ7M4L6 RNU6-461P-201ENST00000364195 107 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 U6atac.2-201ENST00000408644 118 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 RNA5SP201-201ENST00000410316 124 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AL513477.1-202ENST00000417061 214 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC112220.1-201ENST00000434628 355 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.42□□□□□ -2.02
SHFQ7M4L6 RPS29P26-201ENST00000477483 171 ntBASIC2.42□□□□□ -2.02
SHFQ7M4L6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms