Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-1119P-201ENST00000384349 108 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 SNORA11.2-201ENST00000408318 127 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AL663109.1-201ENST00000411498 844 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 NCOR1P3-201ENST00000420479 303 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC012306.1-201ENST00000423267 114 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 SNRPEP8-201ENST00000442866 260 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.65□□□□□ -2.15
NIPAL3Q6P499 TPT1P7-201ENST00000458300 517 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 RNU1-131P-201ENST00000458943 161 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 ATP5EP1-201ENST00000510257 156 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC087854.1-201ENST00000519706 414 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC005786.1-201ENST00000588553 154 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC010620.1-201ENST00000601088 1102 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC092747.3-201ENST00000603769 301 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AP001330.5-201ENST00000607176 411 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC009318.2-201ENST00000610917 651 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 AC022079.1-201ENST00000621546 602 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 SNORA43.4-201ENST00000629559 138 ntBASIC1.65□□□□□ -2.15
NIPAL3Q6P499 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
NIPAL3Q6P499 RNU6-1322P-201ENST00000364309 107 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 SNORA32.2-201ENST00000384049 122 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 VN1R36P-201ENST00000414936 291 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.64□□□□□ -2.15
NIPAL3Q6P499 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RPL7P54-201ENST00000438336 674 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU7-14P-201ENST00000459331 62 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU6-261P-201ENST00000459506 102 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AC130509.1-201ENST00000464158 433 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RPL39P5-202ENST00000512505 151 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU6-1038P-201ENST00000516516 104 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU6-1098P-201ENST00000516772 96 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU2-44P-201ENST00000516795 194 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU6-612P-201ENST00000516909 102 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 RNU6-323P-201ENST00000521915 107 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AC027807.1-201ENST00000559921 996 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AC090517.1-201ENST00000569307 266 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AC064807.4-201ENST00000607201 407 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 AC103705.1-201ENST00000619013 241 ntBASIC1.64□□□□□ -2.15
NIPAL3Q6P499 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NIPAL3Q6P499 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NIPAL3Q6P499 RNU6-1026P-201ENST00000384465 108 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 SNORA40.18-201ENST00000391200 128 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 MIR1261-201ENST00000408659 82 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC139712.2-201ENST00000424302 339 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC083798.1-201ENST00000472671 131 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC021146.2-201ENST00000504736 556 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.63□□□□□ -2.15
NIPAL3Q6P499 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC104383.1-201ENST00000530297 370 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC025423.5-201ENST00000550230 219 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 RPL17P51-201ENST00000605218 238 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC116312.1-201ENST00000606841 314 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AL357078.3-201ENST00000607528 618 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 AC005520.5-201ENST00000613926 164 ntBASIC1.63□□□□□ -2.15
NIPAL3Q6P499 MTND4P23-201ENST00000447723 1363 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 RNU6-227P-201ENST00000362865 103 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 SNORA69-201ENST00000383895 132 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 Y_RNA.409-201ENST00000383990 98 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 Y_RNA.481-201ENST00000384373 102 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 RNA5SP100-201ENST00000410903 110 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 RNA5SP59-201ENST00000410922 110 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 HSPE1P21-201ENST00000438283 308 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 PPP1R2P5-201ENST00000457256 603 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC007547.1-201ENST00000462177 490 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 TOMM22P6-201ENST00000465035 409 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 RNU6-1069P-201ENST00000516612 133 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 SNORA44.1-201ENST00000517031 108 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 MTND1P15-201ENST00000579262 949 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC010900.2-201ENST00000604508 210 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AC009994.1-201ENST00000606889 253 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
NIPAL3Q6P499 AL356292.1-201ENST00000283110 373 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 SNORD31B-201ENST00000364977 69 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 RNU6-38P-201ENST00000384085 107 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 RNU6-1093P-201ENST00000391194 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms