Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 RNU4-21P-201ENST00000362802 126 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 RNU6-360P-201ENST00000390944 104 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 MIR208B-201ENST00000401172 77 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 RNU2-9P-201ENST00000410194 145 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 C8orf59P1-201ENST00000429930 303 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC245047.4-201ENST00000433189 144 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC016925.1-201ENST00000458303 298 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 SNORD42A-201ENST00000459584 64 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC007547.1-201ENST00000462177 490 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.34□□□□□ -2.19
SSX2Q16385 FO393415.2-201ENST00000480085 343 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.34□□□□□ -2.19
SSX2Q16385 MTND1P22-201ENST00000510572 951 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AC060788.1-201ENST00000521318 469 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AP005136.1-201ENST00000579765 429 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AP001836.1-201ENST00000604675 523 ntBASIC1.34□□□□□ -2.19
SSX2Q16385 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.34□□□□□ -2.19
SSX2Q16385 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 RNU6-181P-201ENST00000363225 107 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 MT-TH-201ENST00000387441 69 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 MTCO2P34-201ENST00000421994 607 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 RPS27P16-201ENST00000425758 201 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AC133104.1-201ENST00000429100 218 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AC002486.1-201ENST00000435098 391 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX2Q16385 SNRPGP9-201ENST00000456025 225 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AC022364.2-201ENST00000457963 554 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX2Q16385 AC098862.1-201ENST00000504991 413 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX2Q16385 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX2Q16385 RNU6-567P-201ENST00000516746 107 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 SNORD60.2-201ENST00000516883 86 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 RNU6-445P-201ENST00000516949 107 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AP005597.4-201ENST00000526762 229 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AP002963.1-201ENST00000530590 184 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX2Q16385 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.33□□□□□ -2.2
SSX2Q16385 MIR3976-201ENST00000606807 139 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AC068944.2-201ENST00000610373 403 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
SSX2Q16385 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SSX2Q16385 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SSX2Q16385 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SSX2Q16385 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
SSX2Q16385 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSX2Q16385 Y_RNA.201-201ENST00000364052 96 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RNU1-96P-201ENST00000364163 162 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RNA5SP213-201ENST00000391031 106 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.32□□□□□ -2.2
SSX2Q16385 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.32□□□□□ -2.2
SSX2Q16385 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.32□□□□□ -2.2
SSX2Q16385 AC007395.1-201ENST00000451333 677 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.32□□□□□ -2.2
SSX2Q16385 HMGN2P9-201ENST00000476875 229 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RPS23P5-201ENST00000495419 428 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 AC008628.2-201ENST00000502605 298 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.32□□□□□ -2.2
SSX2Q16385 AC091435.1-201ENST00000505442 584 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 AC079140.2-201ENST00000506193 142 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RNU6-1041P-201ENST00000516254 102 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RN7SKP287-201ENST00000516546 266 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 MTND1P24-201ENST00000552175 861 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.32□□□□□ -2.2
SSX2Q16385 MIR4769-201ENST00000584126 77 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 AC093424.1-201ENST00000604999 338 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RNU6-85P-201ENST00000605989 107 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 AL360219.1-201ENST00000610230 366 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 SNORA43.4-201ENST00000629559 138 ntBASIC1.32□□□□□ -2.2
SSX2Q16385 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.32□□□□□ -2.2
SSX2Q16385 FGF7P2-201ENST00000332473 296 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RNU1-76P-201ENST00000362903 159 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 Y_RNA.132-201ENST00000363421 102 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RNU6-877P-201ENST00000383868 107 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RNY3P10-201ENST00000384764 102 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RNU6-482P-201ENST00000391068 107 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RN7SKP101-201ENST00000411376 320 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX2Q16385 ARL5AP1-201ENST00000418991 388 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 MTND2P18-201ENST00000419962 1030 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX2Q16385 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.31□□□□□ -2.2
SSX2Q16385 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.31□□□□□ -2.2
SSX2Q16385 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.31□□□□□ -2.2
SSX2Q16385 AC079140.5-201ENST00000507882 310 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC108078.1-201ENST00000508073 725 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC079140.3-201ENST00000511111 550 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 RN7SKP219-201ENST00000516825 296 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC069113.1-201ENST00000517763 267 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms