Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC002064.3-201ENST00000623448 346 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B3Q15393 MIR1244-3-201ENST00000635744 85 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 MIR1244-2-201ENST00000636449 85 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 MIR1244-4-202ENST00000636813 85 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B3Q15393 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
SF3B3Q15393 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SF3B3Q15393 AC138915.1-201ENST00000565427 1685 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SF3B3Q15393 RNU6-227P-201ENST00000362865 103 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 SNORD21-201ENST00000383953 95 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 RNU6-784P-201ENST00000384330 106 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 Y_RNA.556-201ENST00000384677 113 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 MIR27B-201ENST00000385129 97 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.24□□□□□ -1.89
SF3B3Q15393 RPL21P2-201ENST00000440049 481 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 AC073910.1-201ENST00000445047 438 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.24□□□□□ -1.89
SF3B3Q15393 RPL30P10-201ENST00000488148 337 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 AC144568.1-201ENST00000520139 137 ntBASIC3.24□□□□□ -1.89
SF3B3Q15393 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.24□□□□□ -1.89
SF3B3Q15393 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.24□□□□□ -1.89
SF3B3Q15393 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.24□□□□□ -1.89
SF3B3Q15393 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.24□□□□□ -1.89
SF3B3Q15393 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SF3B3Q15393 Y_RNA.210-201ENST00000364161 110 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 Y_RNA.512-201ENST00000384518 102 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 RPL21P1-201ENST00000399532 476 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 U3.37-201ENST00000408528 213 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 RPL26P27-201ENST00000414397 437 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.23□□□□□ -1.89
SF3B3Q15393 AC098831.1-201ENST00000440661 216 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 RNU7-169P-201ENST00000459456 61 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 TRBV12-1-201ENST00000479785 344 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 Y_RNA.668-201ENST00000516233 93 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 RNA5SP320-201ENST00000516263 124 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 LINC00933-203ENST00000559812 219 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 MYL12BP1-201ENST00000569826 507 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 MIR3609-201ENST00000582661 80 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 AC078899.3-201ENST00000599065 212 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 RPL23AP78-201ENST00000599928 470 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B3Q15393 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B3Q15393 AC022336.2-201ENST00000568966 2538 ntBASIC3.23□□□□□ -1.89
SF3B3Q15393 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B3Q15393 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU6-105P-201ENST00000363909 104 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 Y_RNA.276-201ENST00000364732 109 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 SNORA63.7-201ENST00000365579 123 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU1-73P-201ENST00000383971 164 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU6-658P-201ENST00000384606 106 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 MIR518C-201ENST00000384822 101 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU6-907P-201ENST00000390924 102 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU6-700P-201ENST00000391043 107 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 FO393413.1-201ENST00000402892 195 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 RNA5SP494-201ENST00000410653 129 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 AC007098.1-201ENST00000420122 367 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 AC092423.1-201ENST00000430165 186 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.22□□□□□ -1.89
SF3B3Q15393 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 OSTCP8-201ENST00000445117 448 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.22□□□□□ -1.89
SF3B3Q15393 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU6-911P-201ENST00000516523 104 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 RNU6-794P-201ENST00000517261 64 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 AP002770.2-201ENST00000543613 532 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.22□□□□□ -1.89
SF3B3Q15393 SNORD53-201ENST00000579969 78 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 MIR4635-201ENST00000583759 79 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 AC100812.1-201ENST00000607622 580 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.22□□□□□ -1.89
SF3B3Q15393 U2.1-201ENST00000618978 145 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.22□□□□□ -1.89
SF3B3Q15393 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B3Q15393 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
SF3B3Q15393 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B3Q15393 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
SF3B3Q15393 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SF3B3Q15393 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
SF3B3Q15393 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SF3B3Q15393 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
SF3B3Q15393 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.89
SF3B3Q15393 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B3Q15393 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B3Q15393 RNU6-874P-201ENST00000362390 105 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 RNU6-942P-201ENST00000363002 107 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 Y_RNA.188-201ENST00000363952 111 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 SNORD56.5-201ENST00000364281 72 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 RNU6-1318P-201ENST00000365389 103 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 U8.9-201ENST00000365667 134 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 RNU6-1222P-201ENST00000384615 107 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 Y_RNA.551-201ENST00000384661 102 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 SNORA69.1-201ENST00000390904 137 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.21□□□□□ -1.9
SF3B3Q15393 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.21□□□□□ -1.9
SF3B3Q15393 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms