Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MTCO1P19-201ENST00000443487 500 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.97□□□□□ -2.56
TFF3Q07654 AC093012.1-202ENST00000549403 582 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.97□□□□□ -2.56
TFF3Q07654 AL163051.2-201ENST00000618976 735 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 AC079416.3-201ENST00000624479 549 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.97□□□□□ -2.57
TFF3Q07654 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
TFF3Q07654 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.98□□□□□ -2.57
TFF3Q07654 ELOCP9-201ENST00000418624 239 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 MTND1P9-201ENST00000453775 944 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 snoU13.30-201ENST00000458951 104 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.98□□□□□ -2.57
TFF3Q07654 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 CR383656.7-201ENST00000548164 174 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 MTND1P15-201ENST00000579262 949 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 MIR5695-201ENST00000579717 85 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 AC131055.1-201ENST00000584626 316 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 MIR4723-201ENST00000585070 81 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 MIR6738-201ENST00000619620 64 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 AL391099.1-201ENST00000624635 187 ntBASIC-0.98□□□□□ -2.57
TFF3Q07654 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
TFF3Q07654 RNU4-32P-201ENST00000363404 141 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 RNU6-743P-201ENST00000364151 106 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 SUGT1P1-201ENST00000379514 476 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 RNU6-444P-201ENST00000383988 108 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 MTCO2P1-201ENST00000424648 477 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.99□□□□□ -2.57
TFF3Q07654 RNU6-965P-201ENST00000516721 96 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 SUMO2P18-201ENST00000518873 252 ntBASIC-0.99□□□□□ -2.57
TFF3Q07654 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.99□□□□□ -2.57
TFF3Q07654 RNU6-944P-201ENST00000364023 107 ntBASIC-1□□□□□ -2.57
TFF3Q07654 Y_RNA.362-201ENST00000365518 110 ntBASIC-1□□□□□ -2.57
TFF3Q07654 RNU6-10P-201ENST00000384036 107 ntBASIC-1□□□□□ -2.57
TFF3Q07654 RNU6-15P-201ENST00000384534 107 ntBASIC-1□□□□□ -2.57
TFF3Q07654 RNU6-925P-201ENST00000384629 104 ntBASIC-1□□□□□ -2.57
TFF3Q07654 MIR649-201ENST00000384843 97 ntBASIC-1□□□□□ -2.57
TFF3Q07654 MIR1303-201ENST00000408625 86 ntBASIC-1□□□□□ -2.57
TFF3Q07654 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-1□□□□□ -2.57
TFF3Q07654 MTCYBP38-201ENST00000417160 1123 ntBASIC-1□□□□□ -2.57
TFF3Q07654 MTCO1P20-201ENST00000425366 358 ntBASIC-1□□□□□ -2.57
TFF3Q07654 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-1□□□□□ -2.57
TFF3Q07654 MTCO3P29-201ENST00000432119 779 ntBASIC-1□□□□□ -2.57
TFF3Q07654 RNU6-922P-201ENST00000516753 99 ntBASIC-1□□□□□ -2.57
TFF3Q07654 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-1□□□□□ -2.57
TFF3Q07654 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-1□□□□□ -2.57
TFF3Q07654 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-1□□□□□ -2.57
TFF3Q07654 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1□□□□□ -2.57
TFF3Q07654 AC009269.6-201ENST00000621778 588 ntBASIC-1□□□□□ -2.57
TFF3Q07654 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1□□□□□ -2.57
TFF3Q07654 SNORA75.6-201ENST00000391318 127 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AL121978.1-201ENST00000402778 359 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.01□□□□□ -2.57
TFF3Q07654 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.01□□□□□ -2.57
TFF3Q07654 AC091860.1-201ENST00000505723 432 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 RNU6-202P-201ENST00000515998 96 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 RNU6-1096P-201ENST00000517089 102 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-1.01□□□□□ -2.57
TFF3Q07654 SUB1P2-201ENST00000556401 297 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.01□□□□□ -2.57
TFF3Q07654 AC105036.1-201ENST00000566222 271 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AC004223.2-201ENST00000590309 544 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AL671309.1-201ENST00000603750 544 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AL358072.1-201ENST00000604156 575 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AL355598.1-201ENST00000604169 202 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 AL034555.1-201ENST00000604816 211 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 MIR1248-201ENST00000629190 106 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 MTND5P31-201ENST00000419366 1374 ntBASIC-1.01□□□□□ -2.57
TFF3Q07654 Y_RNA.62-201ENST00000362840 99 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 RNU6-529P-201ENST00000363383 104 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 RNU6-31P-201ENST00000384388 108 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 PCNPP3-201ENST00000393579 471 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-1.02□□□□□ -2.57
TFF3Q07654 AL162725.1-201ENST00000435405 301 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AC074133.1-201ENST00000515696 183 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 RNU2-53P-201ENST00000516257 147 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AC022868.1-201ENST00000517767 391 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 MIR5697-201ENST00000578045 78 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AC080078.2-201ENST00000603766 501 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-1.02□□□□□ -2.57
TFF3Q07654 MIR3976-201ENST00000606807 139 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AP002360.4-201ENST00000606980 481 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 SNORA25.18-201ENST00000607153 114 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AC013476.2-201ENST00000614456 459 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 AC104820.1-201ENST00000624183 307 ntBASIC-1.02□□□□□ -2.57
TFF3Q07654 MIR103A2-201ENST00000362154 78 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 Y_RNA.25-201ENST00000362528 102 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 RNA5SP323-201ENST00000391094 133 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.03□□□□□ -2.57
TFF3Q07654 C1DP2-201ENST00000418167 426 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 USP9YP14-201ENST00000430663 563 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 MTND1P30-201ENST00000441241 901 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 SPINT5P-201ENST00000448174 155 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 C1DP4-201ENST00000455429 424 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 AC245047.8-201ENST00000456455 284 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-1.03□□□□□ -2.57
TFF3Q07654 ACA59.2-201ENST00000517061 156 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms