Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 C1DP4-201ENST00000455429 424 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AC022364.2-201ENST00000457963 554 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AC011406.1-201ENST00000512440 370 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 RNY4P37-201ENST00000516225 96 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 TPRKBP2-201ENST00000565969 475 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 MIR4514-201ENST00000581410 57 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AC007742.2-201ENST00000618226 398 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AC024940.5-201ENST00000622889 474 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
HIST1H1AQ02539 RNU6-190P-201ENST00000384154 102 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 RNU6-45P-201ENST00000384471 107 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 RNU6-1031P-201ENST00000384773 107 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 MTCYBP2-201ENST00000407745 171 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AL158053.1-201ENST00000441503 453 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 RPL39P39-201ENST00000455840 151 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AC119751.4-201ENST00000507498 357 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 RNU6-947P-201ENST00000516264 106 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AC106038.2-201ENST00000520706 568 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AC090888.2-201ENST00000559765 1144 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AL929325.1-201ENST00000603096 117 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 AC080078.2-201ENST00000603766 501 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.01□□□□□ -2.41
HIST1H1AQ02539 RNU4-67P-201ENST00000364569 141 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 SMIM11P1-201ENST00000369586 178 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
HIST1H1AQ02539 RNU6-1105P-201ENST00000384774 107 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 MIR598-201ENST00000384868 97 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 SNORA75.2-201ENST00000391138 150 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 SNORA75.3-201ENST00000391231 150 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 UBE2V1P15-201ENST00000407776 448 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0□□□□□ -2.41
HIST1H1AQ02539 RNU7-14P-201ENST00000459331 62 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0□□□□□ -2.41
HIST1H1AQ02539 AC016256.1-201ENST00000547971 354 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 AC104072.1-201ENST00000568817 668 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 MIR3912-201ENST00000577566 105 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 MIR3146-201ENST00000580367 79 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 AL357312.1-201ENST00000603879 298 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 AL356157.2-201ENST00000605122 111 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 CTHRC1P1-201ENST00000605383 469 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 U6.42-201ENST00000618440 107 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 MIR338-201ENST00000636369 67 ntBASIC0□□□□□ -2.41
HIST1H1AQ02539 U3.9-201ENST00000363823 204 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 SNORA36.2-201ENST00000384004 127 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AL034345.1-201ENST00000407768 123 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC000111.3-201ENST00000433478 193 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AP000797.1-201ENST00000478870 387 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC021146.8-201ENST00000507455 733 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC112206.3-201ENST00000514578 389 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AL136520.1-202ENST00000555494 763 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC109446.1-201ENST00000566172 220 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC110760.3-201ENST00000598794 467 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 RPL17P51-201ENST00000605218 238 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 FRG1KP-201ENST00000623592 341 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 SNORD98-201ENST00000636377 67 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC100810.6-201ENST00000638068 285 ntBASIC-0.01□□□□□ -2.41
HIST1H1AQ02539 AC092268.1-201ENST00000342691 405 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 MIR653-201ENST00000385279 96 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 SNORD41-201ENST00000386967 70 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 RPS20P2-201ENST00000402520 389 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC244098.3-201ENST00000424803 96 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 MTND5P2-201ENST00000442927 1142 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 MTCO3P9-201ENST00000506989 781 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 RNU2-34P-201ENST00000516534 121 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC021231.3-201ENST00000558497 370 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AL512347.1-201ENST00000566420 503 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 Z98751.3-201ENST00000604447 521 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 MIR98-201ENST00000606724 119 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC100812.1-201ENST00000607622 580 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AL513423.1-201ENST00000621695 132 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC106754.2-201ENST00000623006 233 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 AC104985.3-201ENST00000623479 597 ntBASIC-0.02□□□□□ -2.41
HIST1H1AQ02539 SNORA63.3-201ENST00000362682 132 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 MIR544A-201ENST00000384855 91 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 RNA5SP222-201ENST00000411039 105 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 CYCTP-201ENST00000504253 315 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AC113347.3-201ENST00000509113 148 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms