Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 Y_RNA.356-201ENST00000365475 113 ntBASIC1.93□□□□□ -2.1
SRPXP78539 Y_RNA.404-201ENST00000383978 102 ntBASIC1.93□□□□□ -2.1
SRPXP78539 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
SRPXP78539 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AL359511.1-201ENST00000402970 211 ntBASIC1.93□□□□□ -2.1
SRPXP78539 RNU6-1050P-201ENST00000410388 107 ntBASIC1.93□□□□□ -2.1
SRPXP78539 RNU6-174P-201ENST00000410406 106 ntBASIC1.93□□□□□ -2.1
SRPXP78539 Y_RNA.597-201ENST00000410463 100 ntBASIC1.93□□□□□ -2.1
SRPXP78539 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
SRPXP78539 RNU6-370P-201ENST00000411008 104 ntBASIC1.93□□□□□ -2.1
SRPXP78539 WARS2P1-201ENST00000429678 537 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 Z82188.1-201ENST00000436709 154 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.93□□□□□ -2.1
SRPXP78539 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
SRPXP78539 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.93□□□□□ -2.1
SRPXP78539 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.93□□□□□ -2.1
SRPXP78539 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 RNU6-965P-201ENST00000516721 96 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AC093027.1-201ENST00000546698 429 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AC021231.3-201ENST00000558497 370 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.93□□□□□ -2.1
SRPXP78539 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 FGF7P1-201ENST00000582820 288 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AL442067.2-201ENST00000614033 363 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.93□□□□□ -2.1
SRPXP78539 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.93□□□□□ -2.1
SRPXP78539 MIR1302-1-201ENST00000637932 143 ntBASIC1.93□□□□□ -2.1
SRPXP78539 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
SRPXP78539 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
SRPXP78539 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
SRPXP78539 AC069528.2-201ENST00000624849 1991 ntBASIC1.92□□□□□ -2.1
SRPXP78539 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SRPXP78539 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.92□□□□□ -2.1
SRPXP78539 AC233981.2-201ENST00000611524 1614 ntBASIC1.92□□□□□ -2.1
SRPXP78539 RNU5B-2P-201ENST00000363036 113 ntBASIC1.92□□□□□ -2.1
SRPXP78539 RNU6-378P-201ENST00000384324 107 ntBASIC1.92□□□□□ -2.1
SRPXP78539 Y_RNA.482-201ENST00000384377 111 ntBASIC1.92□□□□□ -2.1
SRPXP78539 SNORA51.11-201ENST00000384442 131 ntBASIC1.92□□□□□ -2.1
SRPXP78539 RNU6-331P-201ENST00000384724 107 ntBASIC1.92□□□□□ -2.1
SRPXP78539 MIR524-201ENST00000385242 87 ntBASIC1.92□□□□□ -2.1
SRPXP78539 MIR549A-201ENST00000385268 96 ntBASIC1.92□□□□□ -2.1
SRPXP78539 RNA5SP201-201ENST00000410316 124 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.92□□□□□ -2.1
SRPXP78539 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.92□□□□□ -2.1
SRPXP78539 EIF1AXP1-201ENST00000419267 435 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AC093019.1-201ENST00000443135 252 ntBASIC1.92□□□□□ -2.1
SRPXP78539 IFNA11P-201ENST00000446352 526 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AL353705.4-201ENST00000449661 238 ntBASIC1.92□□□□□ -2.1
SRPXP78539 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SRPXP78539 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
SRPXP78539 Y_RNA.635-201ENST00000459041 101 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AC018868.1-201ENST00000491307 315 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.92□□□□□ -2.1
SRPXP78539 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
SRPXP78539 RNA5SP384-201ENST00000516615 116 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.92□□□□□ -2.1
SRPXP78539 APOOP3-201ENST00000536787 586 ntBASIC1.92□□□□□ -2.1
SRPXP78539 AC099654.5-201ENST00000636479 350 ntBASIC1.92□□□□□ -2.1
SRPXP78539 MTND4P1-201ENST00000457501 1466 ntBASIC1.92□□□□□ -2.1
SRPXP78539 MTND5P9-201ENST00000503854 1755 ntBASIC1.92□□□□□ -2.1
SRPXP78539 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SRPXP78539 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SRPXP78539 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SRPXP78539 MIR208A-201ENST00000362287 71 ntBASIC1.91□□□□□ -2.1
SRPXP78539 Y_RNA.2-201ENST00000362330 96 ntBASIC1.91□□□□□ -2.1
SRPXP78539 Y_RNA.263-201ENST00000364659 114 ntBASIC1.91□□□□□ -2.1
SRPXP78539 RNU5E-4P-201ENST00000364931 120 ntBASIC1.91□□□□□ -2.1
SRPXP78539 RNU6-867P-201ENST00000364956 107 ntBASIC1.91□□□□□ -2.1
SRPXP78539 RNU1-52P-201ENST00000384190 164 ntBASIC1.91□□□□□ -2.1
SRPXP78539 SNORA75.4-201ENST00000391278 119 ntBASIC1.91□□□□□ -2.1
SRPXP78539 MIR208B-201ENST00000401172 77 ntBASIC1.91□□□□□ -2.1
SRPXP78539 RNA5SP494-201ENST00000410653 129 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AC012306.1-201ENST00000423267 114 ntBASIC1.91□□□□□ -2.1
SRPXP78539 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.91□□□□□ -2.1
SRPXP78539 SNRPEP8-201ENST00000442866 260 ntBASIC1.91□□□□□ -2.1
SRPXP78539 RPS3AP12-201ENST00000443616 753 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AL513124.1-201ENST00000450410 614 ntBASIC1.91□□□□□ -2.1
SRPXP78539 CYP2C59P-201ENST00000457790 269 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AC087477.1-201ENST00000465747 340 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AC104435.1-201ENST00000483483 166 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AC068781.1-201ENST00000488231 618 ntBASIC1.91□□□□□ -2.1
SRPXP78539 RPL23AP75-201ENST00000491601 451 ntBASIC1.91□□□□□ -2.1
SRPXP78539 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.91□□□□□ -2.1
SRPXP78539 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.91□□□□□ -2.1
SRPXP78539 RNU6-559P-201ENST00000516151 98 ntBASIC1.91□□□□□ -2.1
SRPXP78539 Y_RNA.708-201ENST00000516950 96 ntBASIC1.91□□□□□ -2.1
SRPXP78539 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
SRPXP78539 CBX3P8-201ENST00000532412 525 ntBASIC1.91□□□□□ -2.1
SRPXP78539 FRG2DP-202ENST00000566967 323 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AL355375.2-201ENST00000574825 175 ntBASIC1.91□□□□□ -2.1
SRPXP78539 MIR3923-201ENST00000579521 83 ntBASIC1.91□□□□□ -2.1
SRPXP78539 MIR4273-201ENST00000582824 84 ntBASIC1.91□□□□□ -2.1
SRPXP78539 AC010928.2-201ENST00000588017 287 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms