Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.15□□□□□ -2.07
CX3CL1P78423 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CL1P78423 AC079600.2-201ENST00000550076 130 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CL1P78423 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.15□□□□□ -2.07
CX3CL1P78423 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CL1P78423 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.15□□□□□ -2.07
CX3CL1P78423 AC010928.2-201ENST00000588017 287 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 ELOCP29-201ENST00000588193 334 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CX3CL1P78423 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.15□□□□□ -2.07
CX3CL1P78423 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.14□□□□□ -2.07
CX3CL1P78423 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CX3CL1P78423 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CX3CL1P78423 U3.9-201ENST00000363823 204 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RNU6-595P-201ENST00000363944 107 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 SNORA38-201ENST00000363946 132 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RNU1-112P-201ENST00000364401 164 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RNU4-9P-201ENST00000364951 139 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 Y_RNA.384-201ENST00000383909 102 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RNU6-331P-201ENST00000384724 107 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 MT-TD-201ENST00000387419 68 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RNU2-32P-201ENST00000411193 191 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RPS26P42-201ENST00000413485 326 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 AC105272.1-201ENST00000438604 198 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.14□□□□□ -2.07
CX3CL1P78423 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CL1P78423 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.14□□□□□ -2.07
CX3CL1P78423 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.14□□□□□ -2.07
CX3CL1P78423 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.14□□□□□ -2.07
CX3CL1P78423 LARP7P3-201ENST00000579888 337 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 AL117336.2-201ENST00000602435 335 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RPL12P50-201ENST00000603116 116 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CL1P78423 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.14□□□□□ -2.07
CX3CL1P78423 AC006386.2-201ENST00000624491 75 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 AC012005.1-201ENST00000624575 75 ntBASIC2.14□□□□□ -2.07
CX3CL1P78423 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.14□□□□□ -2.07
CX3CL1P78423 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CX3CL1P78423 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.14□□□□□ -2.07
CX3CL1P78423 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
CX3CL1P78423 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
CX3CL1P78423 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CX3CL1P78423 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CX3CL1P78423 RNU4-73P-201ENST00000363164 141 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 RNU6-546P-201ENST00000383991 107 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 U8.10-201ENST00000384260 133 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 SNORD116-29-201ENST00000384516 83 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 RNU6-310P-201ENST00000384655 107 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 MIR9-1-201ENST00000385198 89 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 MIR561-201ENST00000385216 97 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 RNU6-1093P-201ENST00000391194 107 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 Y_RNA.646-201ENST00000410980 101 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 CBX3P6-201ENST00000430257 527 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 OR2AQ1P-201ENST00000451972 200 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 Y_RNA.632-201ENST00000459189 102 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 AC068781.1-201ENST00000488231 618 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.13□□□□□ -2.07
CX3CL1P78423 SCARNA16.2-201ENST00000516520 172 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 RNU6-965P-201ENST00000516721 96 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 HSPE1P18-201ENST00000517602 280 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 EIF4A1P12-201ENST00000551910 141 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 EIF4BP1-201ENST00000554881 351 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.13□□□□□ -2.07
CX3CL1P78423 AC005014.2-201ENST00000607795 599 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 MTND4LP32-201ENST00000636111 270 ntBASIC2.13□□□□□ -2.07
CX3CL1P78423 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CX3CL1P78423 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CX3CL1P78423 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CX3CL1P78423 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CX3CL1P78423 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CL1P78423 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CX3CL1P78423 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CX3CL1P78423 Y_RNA.67-201ENST00000362870 100 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 Y_RNA.259-201ENST00000364619 101 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 SNORA25B-201ENST00000365507 128 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 MIR487A-201ENST00000385009 80 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 RNY4P36-201ENST00000391116 96 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 MTCO3P29-201ENST00000432119 779 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
CX3CL1P78423 AC009238.1-201ENST00000442165 424 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 AC025750.2-201ENST00000442609 450 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 AC009237.6-201ENST00000446969 424 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 RPL30P10-201ENST00000488148 337 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 RN7SKP132-201ENST00000516001 208 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 AC022616.8-201ENST00000533569 253 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 GTF3AP2-201ENST00000557014 266 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 MIR5690-201ENST00000583739 73 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 MIR4635-201ENST00000583759 79 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CL1P78423 MIR7106-201ENST00000612419 65 ntBASIC2.12□□□□□ -2.07
CX3CL1P78423 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CL1P78423 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.12□□□□□ -2.07
CX3CL1P78423 ZNF271P-202ENST00000465539 1970 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms