Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC146507.2-201ENST00000460608 476 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 AC117440.1-201ENST00000474107 571 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RPL30P12-201ENST00000474666 353 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 AL049830.2-201ENST00000480072 201 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 AC098869.1-201ENST00000481627 292 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 AC067942.3-201ENST00000512025 362 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RNU5F-8P-201ENST00000515941 111 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 ACA59.2-201ENST00000517061 156 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 MIR2355-201ENST00000517199 87 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.51□□□□□ -1.85
HERVK_113P62684 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.51□□□□□ -1.85
HERVK_113P62684 AC096772.1-201ENST00000609146 564 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RMST_6.1-201ENST00000611980 203 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 AC078938.1-201ENST00000620993 318 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 MIR3529-201ENST00000637713 78 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 AC093831.2-201ENST00000624393 3427 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RNU6-879P-201ENST00000364328 108 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RNA5SP126-201ENST00000365092 109 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RNU6-17P-201ENST00000384245 107 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RNY3P4-201ENST00000384428 101 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RNU6-18P-201ENST00000384527 107 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 MIR153-2-201ENST00000385225 87 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 MT-TR-201ENST00000387439 65 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 AL139281.1-201ENST00000422120 335 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RN7SL75P-201ENST00000461926 281 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 RN7SL330P-201ENST00000469709 307 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 TRBVB-201ENST00000477100 408 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 AC107222.1-201ENST00000510899 637 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 AP000867.2-201ENST00000532468 320 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.5□□□□□ -1.85
HERVK_113P62684 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.5□□□□□ -1.85
HERVK_113P62684 MIR5047-201ENST00000579212 100 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 AC006111.3-201ENST00000622137 383 ntBASIC3.5□□□□□ -1.85
HERVK_113P62684 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.49□□□□□ -1.85
HERVK_113P62684 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERVK_113P62684 MTND5P6-201ENST00000422338 1798 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 Y_RNA.14-201ENST00000362415 103 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 RN7SKP58-201ENST00000411010 305 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.49□□□□□ -1.85
HERVK_113P62684 RPL23AP95-201ENST00000426806 265 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AC105272.1-201ENST00000438604 198 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AL161651.1-201ENST00000440882 223 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.49□□□□□ -1.85
HERVK_113P62684 AP000870.1-201ENST00000472927 406 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AC083906.5-201ENST00000503722 328 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AC016632.1-201ENST00000503994 196 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.49□□□□□ -1.85
HERVK_113P62684 RN7SKP132-201ENST00000516001 208 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 Y_RNA.680-201ENST00000516441 93 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.49□□□□□ -1.85
HERVK_113P62684 MIR3128-201ENST00000581957 66 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERVK_113P62684 AL356157.2-201ENST00000605122 111 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 AC011476.5-201ENST00000615594 130 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 SNORA43.4-201ENST00000629559 138 ntBASIC3.49□□□□□ -1.85
HERVK_113P62684 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.49□□□□□ -1.85
HERVK_113P62684 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERVK_113P62684 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HERVK_113P62684 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
HERVK_113P62684 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.49□□□□□ -1.85
HERVK_113P62684 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HERVK_113P62684 RNU6-212P-201ENST00000362642 104 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 RNU6-1301P-201ENST00000362724 104 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 Y_RNA.143-201ENST00000363520 106 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 SNORD115-32-201ENST00000364079 82 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 Y_RNA.257-201ENST00000364596 102 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
HERVK_113P62684 RNU6-926P-201ENST00000384075 107 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 SNORD78.2-201ENST00000391076 69 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 SNORA48.8-201ENST00000391324 134 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 ARL5AP4-201ENST00000430731 512 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.48□□□□□ -1.85
HERVK_113P62684 RPL39P29-201ENST00000447779 157 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 RPL39P38-201ENST00000467018 153 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 AC023824.2-201ENST00000566185 400 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 Y_RNA.772-201ENST00000606692 102 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 MIR376A1-201ENST00000616574 68 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.48□□□□□ -1.85
HERVK_113P62684 RBBP8P1-201ENST00000449447 1844 ntBASIC3.48□□□□□ -1.85
HERVK_113P62684 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.48□□□□□ -1.85
HERVK_113P62684 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HERVK_113P62684 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
HERVK_113P62684 AC073325.2-201ENST00000339545 159 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 RNU6-1141P-201ENST00000364520 107 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 SNORA36A-201ENST00000384221 132 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 SNORA46-201ENST00000384762 135 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 RNU2-20P-201ENST00000410425 191 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 RNU6-1077P-201ENST00000410506 102 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AC096920.1-201ENST00000423991 241 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AL445305.1-201ENST00000432577 575 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 RPS15AP5-201ENST00000436276 388 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 Z98949.2-201ENST00000440996 144 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AC010099.1-201ENST00000455434 375 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AP001025.1-201ENST00000486139 332 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 HMGB1P35-201ENST00000503360 598 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 Y_RNA.713-201ENST00000517013 96 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms