Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNA5SP354-201ENST00000391247 136 ntBASIC3□□□□□ -1.93
CLRN1P58418 SNORA11-201ENST00000408789 128 ntBASIC3□□□□□ -1.93
CLRN1P58418 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3□□□□□ -1.93
CLRN1P58418 AC009414.1-201ENST00000427200 443 ntBASIC3□□□□□ -1.93
CLRN1P58418 Z98949.2-201ENST00000440996 144 ntBASIC3□□□□□ -1.93
CLRN1P58418 AL358232.1-201ENST00000448030 501 ntBASIC3□□□□□ -1.93
CLRN1P58418 RPS4XP2-201ENST00000458402 793 ntBASIC3□□□□□ -1.93
CLRN1P58418 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3□□□□□ -1.93
CLRN1P58418 RPL36AP48-201ENST00000485521 314 ntBASIC3□□□□□ -1.93
CLRN1P58418 HMGB3P17-201ENST00000504195 649 ntBASIC3□□□□□ -1.93
CLRN1P58418 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3□□□□□ -1.93
CLRN1P58418 SNORA40.9-201ENST00000515895 93 ntBASIC3□□□□□ -1.93
CLRN1P58418 SNORA31.6-201ENST00000516241 130 ntBASIC3□□□□□ -1.93
CLRN1P58418 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3□□□□□ -1.93
CLRN1P58418 AL162713.1-201ENST00000604480 262 ntBASIC3□□□□□ -1.93
CLRN1P58418 RMST_8.1-201ENST00000610287 165 ntBASIC3□□□□□ -1.93
CLRN1P58418 uc_338.14-201ENST00000613162 166 ntBASIC3□□□□□ -1.93
CLRN1P58418 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3□□□□□ -1.93
CLRN1P58418 AL357075.2-201ENST00000614906 189 ntBASIC3□□□□□ -1.93
CLRN1P58418 AC141273.2-201ENST00000618989 130 ntBASIC3□□□□□ -1.93
CLRN1P58418 AC092628.2-201ENST00000622492 339 ntBASIC3□□□□□ -1.93
CLRN1P58418 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLRN1P58418 BX322639.1-202ENST00000423987 2213 ntBASIC3□□□□□ -1.93
CLRN1P58418 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLRN1P58418 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLRN1P58418 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLRN1P58418 RNU6-626P-201ENST00000363354 107 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 SNORD27-201ENST00000363981 72 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 Y_RNA.416-201ENST00000384014 113 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 RNU6-20P-201ENST00000384106 107 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 Y_RNA.462-201ENST00000384268 102 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 RNU1-57P-201ENST00000384491 166 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 MIR548H3-201ENST00000408771 118 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 RN7SKP111-201ENST00000410349 271 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 Y_RNA.595-201ENST00000410403 105 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.99□□□□□ -1.93
CLRN1P58418 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.99□□□□□ -1.93
CLRN1P58418 RBMY2UP-201ENST00000453474 324 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 HSPE1P25-201ENST00000455484 251 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 HMGN1P18-201ENST00000457642 277 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 AC073901.1-201ENST00000462471 408 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 AC110768.1-201ENST00000509222 400 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 MIR2276-201ENST00000516886 89 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 SCARNA24.2-201ENST00000516968 130 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 RNU6-1231P-201ENST00000517185 103 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 AC093331.1-201ENST00000521474 169 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 AC034105.4-201ENST00000568304 277 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 MZT1P2-201ENST00000604387 248 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 AC099778.2-201ENST00000610904 211 ntBASIC2.99□□□□□ -1.93
CLRN1P58418 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.99□□□□□ -1.93
CLRN1P58418 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.99□□□□□ -1.93
CLRN1P58418 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLRN1P58418 AL109809.4-201ENST00000603520 2185 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.98□□□□□ -1.93
CLRN1P58418 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLRN1P58418 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLRN1P58418 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLRN1P58418 RNU4-15P-201ENST00000362613 141 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RNU4-90P-201ENST00000362773 141 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RNU6-655P-201ENST00000362858 107 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RNU5F-3P-201ENST00000363767 117 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 Y_RNA.286-201ENST00000364813 102 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 SNORA73.2-201ENST00000364946 201 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLRN1P58418 AP002088.1-201ENST00000382740 395 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RNU4-30P-201ENST00000410245 143 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RNU5A-5P-201ENST00000411054 116 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AC093578.1-201ENST00000415219 368 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 Z98742.2-201ENST00000431564 187 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.98□□□□□ -1.93
CLRN1P58418 AC010401.1-201ENST00000463867 348 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AL121594.1-201ENST00000475906 575 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AC103975.1-201ENST00000482506 483 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RPS23P5-201ENST00000495419 428 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 Y_RNA.683-201ENST00000516508 93 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 SNORD59.2-201ENST00000516873 68 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RNU6-111P-201ENST00000517179 105 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 IGKV2-26-201ENST00000518305 343 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.98□□□□□ -1.93
CLRN1P58418 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.98□□□□□ -1.93
CLRN1P58418 AC079598.5-201ENST00000547460 117 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 RRN3P3-201ENST00000549207 578 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.98□□□□□ -1.93
CLRN1P58418 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.98□□□□□ -1.93
CLRN1P58418 AL356575.1-201ENST00000603008 283 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 PCGEM1.1-201ENST00000613431 131 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 AC058791.1-201ENST00000608412 3198 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 MTND5P35-201ENST00000557537 1720 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 MAPK10-322ENST00000641485 4530 ntBASIC2.98□□□□□ -1.93
CLRN1P58418 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.98□□□□□ -1.93
CLRN1P58418 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLRN1P58418 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.97□□□□□ -1.93
CLRN1P58418 RNU1-75P-201ENST00000347264 129 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 Y_RNA.20-201ENST00000362479 113 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 RNU6-1210P-201ENST00000363775 107 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 Y_RNA.179-201ENST00000363844 90 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 RNU6-290P-201ENST00000365212 101 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 RNU6-245P-201ENST00000384020 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms