Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL356292.1-201ENST00000283110 373 ntBASIC1.71□□□□□ -2.14
LIM2P55344 RNU6-227P-201ENST00000362865 103 ntBASIC1.71□□□□□ -2.14
LIM2P55344 RNU6-1159P-201ENST00000362933 107 ntBASIC1.71□□□□□ -2.14
LIM2P55344 Y_RNA.99-201ENST00000363138 105 ntBASIC1.71□□□□□ -2.14
LIM2P55344 RNU4-75P-201ENST00000364621 146 ntBASIC1.71□□□□□ -2.14
LIM2P55344 RNU6-483P-201ENST00000384088 108 ntBASIC1.71□□□□□ -2.14
LIM2P55344 SNORD14D-201ENST00000384390 87 ntBASIC1.71□□□□□ -2.14
LIM2P55344 MIR518A2-201ENST00000384966 87 ntBASIC1.71□□□□□ -2.14
LIM2P55344 MIR17-201ENST00000385012 84 ntBASIC1.71□□□□□ -2.14
LIM2P55344 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
LIM2P55344 BTF3L4P2-201ENST00000392798 346 ntBASIC1.71□□□□□ -2.14
LIM2P55344 AL356379.1-201ENST00000414105 126 ntBASIC1.71□□□□□ -2.14
LIM2P55344 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.71□□□□□ -2.14
LIM2P55344 DLGAP5P1-201ENST00000430307 464 ntBASIC1.71□□□□□ -2.14
LIM2P55344 MTND1P34-201ENST00000438556 671 ntBASIC1.71□□□□□ -2.14
LIM2P55344 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.14
LIM2P55344 AC145146.1-201ENST00000496370 254 ntBASIC1.71□□□□□ -2.14
LIM2P55344 YWHAEP4-201ENST00000505390 198 ntBASIC1.71□□□□□ -2.14
LIM2P55344 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.71□□□□□ -2.14
LIM2P55344 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.71□□□□□ -2.14
LIM2P55344 BNIP3P25-201ENST00000596023 559 ntBASIC1.71□□□□□ -2.14
LIM2P55344 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.71□□□□□ -2.14
LIM2P55344 AC116312.1-201ENST00000606841 314 ntBASIC1.71□□□□□ -2.14
LIM2P55344 AL357078.3-201ENST00000607528 618 ntBASIC1.71□□□□□ -2.14
LIM2P55344 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.71□□□□□ -2.14
LIM2P55344 Y_RNA.9-201ENST00000362354 101 ntBASIC1.7□□□□□ -2.14
LIM2P55344 Y_RNA.41-201ENST00000362646 102 ntBASIC1.7□□□□□ -2.14
LIM2P55344 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LIM2P55344 SNORA46.1-201ENST00000391069 153 ntBASIC1.7□□□□□ -2.14
LIM2P55344 AL590002.1-201ENST00000406554 418 ntBASIC1.7□□□□□ -2.14
LIM2P55344 AL357139.1-201ENST00000407792 426 ntBASIC1.7□□□□□ -2.14
LIM2P55344 MIR1289-2-201ENST00000408360 111 ntBASIC1.7□□□□□ -2.14
LIM2P55344 RNU6-1068P-201ENST00000410958 103 ntBASIC1.7□□□□□ -2.14
LIM2P55344 MTCO1P21-201ENST00000416634 589 ntBASIC1.7□□□□□ -2.14
LIM2P55344 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LIM2P55344 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.7□□□□□ -2.14
LIM2P55344 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.7□□□□□ -2.14
LIM2P55344 NDUFA5P4-201ENST00000436704 385 ntBASIC1.7□□□□□ -2.14
LIM2P55344 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.7□□□□□ -2.14
LIM2P55344 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.7□□□□□ -2.14
LIM2P55344 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.7□□□□□ -2.14
LIM2P55344 PTP4A1P4-201ENST00000512479 322 ntBASIC1.7□□□□□ -2.14
LIM2P55344 RNU6-612P-201ENST00000516909 102 ntBASIC1.7□□□□□ -2.14
LIM2P55344 AK6P1-201ENST00000540219 478 ntBASIC1.7□□□□□ -2.14
LIM2P55344 CYP4A27P-201ENST00000567218 190 ntBASIC1.7□□□□□ -2.14
LIM2P55344 AL109918.3-201ENST00000603072 338 ntBASIC1.7□□□□□ -2.14
LIM2P55344 AC022202.1-201ENST00000613515 211 ntBASIC1.7□□□□□ -2.14
LIM2P55344 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LIM2P55344 AL450472.1-202ENST00000637286 180 ntBASIC1.7□□□□□ -2.14
LIM2P55344 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.7□□□□□ -2.14
LIM2P55344 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.69□□□□□ -2.14
LIM2P55344 RNU6-451P-201ENST00000362921 107 ntBASIC1.69□□□□□ -2.14
LIM2P55344 Y_RNA.100-201ENST00000363141 102 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RNY4P14-201ENST00000363656 96 ntBASIC1.69□□□□□ -2.14
LIM2P55344 U3.9-201ENST00000363823 204 ntBASIC1.69□□□□□ -2.14
LIM2P55344 Y_RNA.318-201ENST00000365131 97 ntBASIC1.69□□□□□ -2.14
LIM2P55344 Y_RNA.402-201ENST00000383972 102 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RNU6-26P-201ENST00000383985 107 ntBASIC1.69□□□□□ -2.14
LIM2P55344 SNORD73A-201ENST00000386062 65 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RNU6-373P-201ENST00000411247 98 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.69□□□□□ -2.14
LIM2P55344 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.69□□□□□ -2.14
LIM2P55344 RNA5SP233-201ENST00000459153 113 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RPS27P21-201ENST00000486977 252 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AC104564.1-201ENST00000493028 407 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.69□□□□□ -2.14
LIM2P55344 AC005741.1-201ENST00000511094 432 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AC025465.4-201ENST00000513422 638 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RNU6-1038P-201ENST00000516516 104 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RNU6-314P-201ENST00000516574 104 ntBASIC1.69□□□□□ -2.14
LIM2P55344 SNORA31.16-201ENST00000516773 139 ntBASIC1.69□□□□□ -2.14
LIM2P55344 RNU6-295P-201ENST00000516901 104 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.69□□□□□ -2.14
LIM2P55344 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AL158827.2-201ENST00000602494 330 ntBASIC1.69□□□□□ -2.14
LIM2P55344 Z98751.3-201ENST00000604447 521 ntBASIC1.69□□□□□ -2.14
LIM2P55344 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
LIM2P55344 FAM157A-202ENST00000615155 405 ntBASIC1.69□□□□□ -2.14
LIM2P55344 SDR42E1P4-201ENST00000620894 481 ntBASIC1.69□□□□□ -2.14
LIM2P55344 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.69□□□□□ -2.14
LIM2P55344 SNORA43.4-201ENST00000629559 138 ntBASIC1.69□□□□□ -2.14
LIM2P55344 AL691447.3-201ENST00000635020 330 ntBASIC1.69□□□□□ -2.14
LIM2P55344 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LIM2P55344 KPNA2P1-201ENST00000458289 1591 ntBASIC1.68□□□□□ -2.14
LIM2P55344 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LIM2P55344 SNORD113-7-201ENST00000363762 77 ntBASIC1.68□□□□□ -2.14
LIM2P55344 Y_RNA.256-201ENST00000364594 104 ntBASIC1.68□□□□□ -2.14
LIM2P55344 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
LIM2P55344 Y_RNA.530-201ENST00000384587 101 ntBASIC1.68□□□□□ -2.14
LIM2P55344 RNU6-780P-201ENST00000391030 104 ntBASIC1.68□□□□□ -2.14
LIM2P55344 AL512604.1-201ENST00000404812 257 ntBASIC1.68□□□□□ -2.14
LIM2P55344 RNA5SP118-201ENST00000410385 109 ntBASIC1.68□□□□□ -2.14
LIM2P55344 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.68□□□□□ -2.14
LIM2P55344 AL645568.3-201ENST00000433683 316 ntBASIC1.68□□□□□ -2.14
LIM2P55344 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
LIM2P55344 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LIM2P55344 AC007547.1-201ENST00000462177 490 ntBASIC1.68□□□□□ -2.14
LIM2P55344 HMGN2P26-201ENST00000463169 339 ntBASIC1.68□□□□□ -2.14
LIM2P55344 RPS29P27-201ENST00000463711 170 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms