Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU6-95P-201ENST00000384697 107 ntBASIC2.2□□□□□ -2.06
LHX1P48742 MIR521-1-201ENST00000384902 87 ntBASIC2.2□□□□□ -2.06
LHX1P48742 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LHX1P48742 Y_RNA.597-201ENST00000410463 100 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RNU2-32P-201ENST00000411193 191 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AL590632.1-201ENST00000424289 371 ntBASIC2.2□□□□□ -2.06
LHX1P48742 MTND4LP16-201ENST00000440828 295 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AL139109.1-201ENST00000455491 297 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RNU7-187P-201ENST00000458985 68 ntBASIC2.2□□□□□ -2.06
LHX1P48742 snoU13.26-201ENST00000459452 105 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AC104564.1-201ENST00000493028 407 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.2□□□□□ -2.06
LHX1P48742 RNU6-864P-201ENST00000516256 108 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RNU6-358P-201ENST00000516564 75 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.2□□□□□ -2.06
LHX1P48742 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AC023043.2-201ENST00000589678 1026 ntBASIC2.2□□□□□ -2.06
LHX1P48742 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.2□□□□□ -2.06
LHX1P48742 SNORA43.4-201ENST00000629559 138 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.19□□□□□ -2.06
LHX1P48742 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LHX1P48742 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LHX1P48742 SNORD116-11-201ENST00000383882 92 ntBASIC2.19□□□□□ -2.06
LHX1P48742 RNU6-546P-201ENST00000383991 107 ntBASIC2.19□□□□□ -2.06
LHX1P48742 RNU1-148P-201ENST00000384472 162 ntBASIC2.19□□□□□ -2.06
LHX1P48742 RNU6-790P-201ENST00000384479 105 ntBASIC2.19□□□□□ -2.06
LHX1P48742 SNORA26.3-201ENST00000391119 136 ntBASIC2.19□□□□□ -2.06
LHX1P48742 EIF1AXP1-201ENST00000419267 435 ntBASIC2.19□□□□□ -2.06
LHX1P48742 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.19□□□□□ -2.06
LHX1P48742 AC010095.1-201ENST00000443543 144 ntBASIC2.19□□□□□ -2.06
LHX1P48742 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.19□□□□□ -2.06
LHX1P48742 AC145146.1-201ENST00000496370 254 ntBASIC2.19□□□□□ -2.06
LHX1P48742 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.19□□□□□ -2.06
LHX1P48742 AC107953.1-201ENST00000522216 297 ntBASIC2.19□□□□□ -2.06
LHX1P48742 CYCSP26-201ENST00000534107 320 ntBASIC2.19□□□□□ -2.06
LHX1P48742 AC021231.3-201ENST00000558497 370 ntBASIC2.19□□□□□ -2.06
LHX1P48742 CPDP1-201ENST00000579660 283 ntBASIC2.19□□□□□ -2.06
LHX1P48742 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.19□□□□□ -2.06
LHX1P48742 AC078795.3-201ENST00000602913 472 ntBASIC2.19□□□□□ -2.06
LHX1P48742 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
LHX1P48742 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.19□□□□□ -2.06
LHX1P48742 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LHX1P48742 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LHX1P48742 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LHX1P48742 RNU4-15P-201ENST00000362613 141 ntBASIC2.18□□□□□ -2.06
LHX1P48742 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
LHX1P48742 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.18□□□□□ -2.06
LHX1P48742 RPL30P16-201ENST00000419341 429 ntBASIC2.18□□□□□ -2.06
LHX1P48742 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LHX1P48742 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
LHX1P48742 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
LHX1P48742 MTND1P11-201ENST00000456661 876 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AC130509.1-201ENST00000464158 433 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AC018710.1-201ENST00000506509 158 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.18□□□□□ -2.06
LHX1P48742 RNU4-49P-201ENST00000516080 140 ntBASIC2.18□□□□□ -2.06
LHX1P48742 RNU6-567P-201ENST00000516746 107 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.18□□□□□ -2.06
LHX1P48742 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.18□□□□□ -2.06
LHX1P48742 MIR3923-201ENST00000579521 83 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AL133215.3-201ENST00000609801 448 ntBASIC2.18□□□□□ -2.06
LHX1P48742 MIR8076-201ENST00000611401 83 ntBASIC2.18□□□□□ -2.06
LHX1P48742 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.18□□□□□ -2.06
LHX1P48742 AC009248.2-201ENST00000619826 254 ntBASIC2.18□□□□□ -2.06
LHX1P48742 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LHX1P48742 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LHX1P48742 Y_RNA.123-201ENST00000363338 102 ntBASIC2.17□□□□□ -2.06
LHX1P48742 Y_RNA.151-201ENST00000363566 112 ntBASIC2.17□□□□□ -2.06
LHX1P48742 SNORA36A-201ENST00000384221 132 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AL356776.1-201ENST00000406574 447 ntBASIC2.17□□□□□ -2.06
LHX1P48742 MTND1P23-201ENST00000416931 372 ntBASIC2.17□□□□□ -2.06
LHX1P48742 MTND1P2-201ENST00000430604 821 ntBASIC2.17□□□□□ -2.06
LHX1P48742 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.17□□□□□ -2.06
LHX1P48742 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.17□□□□□ -2.06
LHX1P48742 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.17□□□□□ -2.06
LHX1P48742 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.17□□□□□ -2.06
LHX1P48742 PCMTD1P1-201ENST00000455560 355 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.17□□□□□ -2.06
LHX1P48742 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.17□□□□□ -2.06
LHX1P48742 SNORA4.4-201ENST00000515921 135 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AC034114.1-201ENST00000520293 285 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AC118273.2-201ENST00000532092 465 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AC018630.3-201ENST00000542637 96 ntBASIC2.17□□□□□ -2.06
LHX1P48742 MIR3126-201ENST00000577443 74 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AL078605.1-201ENST00000603529 500 ntBASIC2.17□□□□□ -2.06
LHX1P48742 Z98751.3-201ENST00000604447 521 ntBASIC2.17□□□□□ -2.06
LHX1P48742 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LHX1P48742 MIR3976-201ENST00000606807 139 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AL450472.1-202ENST00000637286 180 ntBASIC2.17□□□□□ -2.06
LHX1P48742 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LHX1P48742 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
LHX1P48742 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
LHX1P48742 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
LHX1P48742 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.16□□□□□ -2.06
LHX1P48742 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
LHX1P48742 RNU6-510P-201ENST00000391239 108 ntBASIC2.16□□□□□ -2.06
LHX1P48742 RNU2-2P-201ENST00000410396 191 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms