Protein–RNA interactions for Protein: P43246

MSH2, DNA mismatch repair protein Msh2, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2P43246 Y_RNA.339-201ENST00000365325 102 ntBASIC2.39□□□□□ -2.03
MSH2P43246 RNU6-306P-201ENST00000384617 107 ntBASIC2.39□□□□□ -2.03
MSH2P43246 MIR548F5-201ENST00000408421 86 ntBASIC2.39□□□□□ -2.03
MSH2P43246 AC074085.1-201ENST00000413598 418 ntBASIC2.39□□□□□ -2.03
MSH2P43246 GPM6BP3-201ENST00000442797 145 ntBASIC2.39□□□□□ -2.03
MSH2P43246 RPS3P1-201ENST00000456781 192 ntBASIC2.39□□□□□ -2.03
MSH2P43246 AC018868.1-201ENST00000491307 315 ntBASIC2.39□□□□□ -2.03
MSH2P43246 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.39□□□□□ -2.03
MSH2P43246 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH2P43246 Y_RNA.691-201ENST00000516611 103 ntBASIC2.39□□□□□ -2.03
MSH2P43246 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.39□□□□□ -2.03
MSH2P43246 UBE2V2P2-201ENST00000587677 504 ntBASIC2.39□□□□□ -2.03
MSH2P43246 POLR3GP2-201ENST00000588366 668 ntBASIC2.39□□□□□ -2.03
MSH2P43246 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.39□□□□□ -2.03
MSH2P43246 MIR6128-201ENST00000615528 109 ntBASIC2.39□□□□□ -2.03
MSH2P43246 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.39□□□□□ -2.03
MSH2P43246 MIR6852-201ENST00000621699 66 ntBASIC2.39□□□□□ -2.03
MSH2P43246 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSH2P43246 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MSH2P43246 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.38□□□□□ -2.03
MSH2P43246 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MSH2P43246 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MSH2P43246 RNU6-142P-201ENST00000384019 107 ntBASIC2.38□□□□□ -2.03
MSH2P43246 RNU6-1274P-201ENST00000384557 107 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.38□□□□□ -2.03
MSH2P43246 EIF1AXP1-201ENST00000419267 435 ntBASIC2.38□□□□□ -2.03
MSH2P43246 Z82205.1-201ENST00000428456 297 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AL353572.1-201ENST00000442490 417 ntBASIC2.38□□□□□ -2.03
MSH2P43246 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MSH2P43246 AC107399.1-201ENST00000451226 265 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.38□□□□□ -2.03
MSH2P43246 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
MSH2P43246 RNU1-54P-201ENST00000517181 120 ntBASIC2.38□□□□□ -2.03
MSH2P43246 SNORA31.25-201ENST00000517242 134 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AC034114.1-201ENST00000520293 285 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
MSH2P43246 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.38□□□□□ -2.03
MSH2P43246 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
MSH2P43246 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
MSH2P43246 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
MSH2P43246 MIR3162-201ENST00000581818 82 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AL031274.2-201ENST00000599419 203 ntBASIC2.38□□□□□ -2.03
MSH2P43246 AL078605.1-201ENST00000603529 500 ntBASIC2.38□□□□□ -2.03
MSH2P43246 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
MSH2P43246 TPTEP1-208ENST00000636884 213 ntBASIC2.38□□□□□ -2.03
MSH2P43246 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
MSH2P43246 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
MSH2P43246 SNORA36A-201ENST00000384221 132 ntBASIC2.37□□□□□ -2.03
MSH2P43246 RNU6-784P-201ENST00000384330 106 ntBASIC2.37□□□□□ -2.03
MSH2P43246 MIR29B2-201ENST00000385055 81 ntBASIC2.37□□□□□ -2.03
MSH2P43246 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
MSH2P43246 AL359511.1-201ENST00000402970 211 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AL356432.1-201ENST00000405809 419 ntBASIC2.37□□□□□ -2.03
MSH2P43246 RPS3AP52-201ENST00000435639 297 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.37□□□□□ -2.03
MSH2P43246 FTH1P25-201ENST00000447665 469 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC104435.1-201ENST00000483483 166 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC107032.1-201ENST00000485945 480 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC116337.1-201ENST00000509680 687 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
MSH2P43246 ACA59.1-201ENST00000515966 143 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH2P43246 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MSH2P43246 AC016256.1-201ENST00000547971 354 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC021231.3-201ENST00000558497 370 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC233702.2-202ENST00000562547 291 ntBASIC2.37□□□□□ -2.03
MSH2P43246 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH2P43246 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.37□□□□□ -2.03
MSH2P43246 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
MSH2P43246 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.37□□□□□ -2.03
MSH2P43246 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
MSH2P43246 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
MSH2P43246 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
MSH2P43246 RNU4-15P-201ENST00000362613 141 ntBASIC2.36□□□□□ -2.03
MSH2P43246 RNU4-56P-201ENST00000364700 142 ntBASIC2.36□□□□□ -2.03
MSH2P43246 SNORA6-201ENST00000384033 151 ntBASIC2.36□□□□□ -2.03
MSH2P43246 SNORA51.11-201ENST00000384442 131 ntBASIC2.36□□□□□ -2.03
MSH2P43246 HMGB3P2-201ENST00000411913 584 ntBASIC2.36□□□□□ -2.03
MSH2P43246 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.36□□□□□ -2.03
MSH2P43246 MTATP6P23-201ENST00000440153 476 ntBASIC2.36□□□□□ -2.03
MSH2P43246 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH2P43246 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH2P43246 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH2P43246 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.36□□□□□ -2.03
MSH2P43246 RNA5SP137-201ENST00000516833 135 ntBASIC2.36□□□□□ -2.03
MSH2P43246 RNU6-667P-201ENST00000517186 102 ntBASIC2.36□□□□□ -2.03
MSH2P43246 FGF7P1-201ENST00000582820 288 ntBASIC2.36□□□□□ -2.03
MSH2P43246 AC007229.1-201ENST00000590455 412 ntBASIC2.36□□□□□ -2.03
MSH2P43246 AC092794.2-201ENST00000620933 563 ntBASIC2.36□□□□□ -2.03
MSH2P43246 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSH2P43246 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MSH2P43246 SNORD50.1-201ENST00000362987 71 ntBASIC2.35□□□□□ -2.03
MSH2P43246 RNA5SP68-201ENST00000363885 119 ntBASIC2.35□□□□□ -2.03
MSH2P43246 RNU6-1286P-201ENST00000383871 107 ntBASIC2.35□□□□□ -2.03
MSH2P43246 MIR518C-201ENST00000384822 101 ntBASIC2.35□□□□□ -2.03
MSH2P43246 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MSH2P43246 RPL37P10-201ENST00000412884 288 ntBASIC2.35□□□□□ -2.03
MSH2P43246 NCOR1P3-201ENST00000420479 303 ntBASIC2.35□□□□□ -2.03
MSH2P43246 MTND4LP11-201ENST00000422184 280 ntBASIC2.35□□□□□ -2.03
MSH2P43246 USP9YP30-201ENST00000430729 455 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms