Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-567P-201ENST00000516746 107 ntBASIC4.25□□□□□ -1.73
RXRBP28702 RNU7-110P-201ENST00000516891 62 ntBASIC4.25□□□□□ -1.73
RXRBP28702 AC015712.3-201ENST00000559380 164 ntBASIC4.25□□□□□ -1.73
RXRBP28702 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.25□□□□□ -1.73
RXRBP28702 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.25□□□□□ -1.73
RXRBP28702 MIR3921-201ENST00000577308 85 ntBASIC4.25□□□□□ -1.73
RXRBP28702 AC008749.1-201ENST00000597650 306 ntBASIC4.25□□□□□ -1.73
RXRBP28702 AC073349.3-201ENST00000617616 186 ntBASIC4.25□□□□□ -1.73
RXRBP28702 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.25□□□□□ -1.73
RXRBP28702 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.25□□□□□ -1.73
RXRBP28702 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RXRBP28702 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RXRBP28702 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-961P-201ENST00000363893 105 ntBASIC4.24□□□□□ -1.73
RXRBP28702 Y_RNA.245-201ENST00000364493 95 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-1286P-201ENST00000383871 107 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-843P-201ENST00000384454 104 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-21P-201ENST00000384710 107 ntBASIC4.24□□□□□ -1.73
RXRBP28702 MIR32-201ENST00000384965 70 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-1154P-201ENST00000391001 104 ntBASIC4.24□□□□□ -1.73
RXRBP28702 BTF3L4P2-201ENST00000392798 346 ntBASIC4.24□□□□□ -1.73
RXRBP28702 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.24□□□□□ -1.73
RXRBP28702 IFNA11P-201ENST00000446352 526 ntBASIC4.24□□□□□ -1.73
RXRBP28702 AC009237.7-201ENST00000447357 229 ntBASIC4.24□□□□□ -1.73
RXRBP28702 MRPS10P1-201ENST00000448483 130 ntBASIC4.24□□□□□ -1.73
RXRBP28702 SNRPGP5-201ENST00000456003 220 ntBASIC4.24□□□□□ -1.73
RXRBP28702 BTF3L4P4-201ENST00000506381 449 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-1114P-201ENST00000516022 107 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-313P-201ENST00000516317 112 ntBASIC4.24□□□□□ -1.73
RXRBP28702 RNU6-572P-201ENST00000516724 80 ntBASIC4.24□□□□□ -1.73
RXRBP28702 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.24□□□□□ -1.73
RXRBP28702 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.24□□□□□ -1.73
RXRBP28702 MIR486-1-201ENST00000612171 68 ntBASIC4.24□□□□□ -1.73
RXRBP28702 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.24□□□□□ -1.73
RXRBP28702 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.24□□□□□ -1.73
RXRBP28702 MIR622-201ENST00000638396 96 ntBASIC4.24□□□□□ -1.73
RXRBP28702 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.24□□□□□ -1.73
RXRBP28702 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RXRBP28702 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RXRBP28702 AC009541.1-201ENST00000438279 2662 ntBASIC4.23□□□□□ -1.73
RXRBP28702 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RXRBP28702 MIR423-201ENST00000362201 94 ntBASIC4.23□□□□□ -1.73
RXRBP28702 Y_RNA.272-201ENST00000364696 102 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RNU6-968P-201ENST00000384076 107 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RNU6-1181P-201ENST00000384191 106 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RNU6-72P-201ENST00000384285 79 ntBASIC4.23□□□□□ -1.73
RXRBP28702 Y_RNA.568-201ENST00000384742 113 ntBASIC4.23□□□□□ -1.73
RXRBP28702 MIR34A-201ENST00000385130 110 ntBASIC4.23□□□□□ -1.73
RXRBP28702 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.23□□□□□ -1.73
RXRBP28702 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.23□□□□□ -1.73
RXRBP28702 SSXP4-201ENST00000451349 245 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RPL23AP3-201ENST00000453844 468 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RNU6-62P-201ENST00000516526 102 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RNU6-1256P-201ENST00000516539 103 ntBASIC4.23□□□□□ -1.73
RXRBP28702 RN7SKP49-201ENST00000516675 260 ntBASIC4.23□□□□□ -1.73
RXRBP28702 SNORA31.20-201ENST00000517111 133 ntBASIC4.23□□□□□ -1.73
RXRBP28702 AC026333.2-201ENST00000542164 106 ntBASIC4.23□□□□□ -1.73
RXRBP28702 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.23□□□□□ -1.73
RXRBP28702 AL365222.1-201ENST00000614661 98 ntBASIC4.23□□□□□ -1.73
RXRBP28702 AC090132.2-201ENST00000615881 347 ntBASIC4.23□□□□□ -1.73
RXRBP28702 AC064859.1-201ENST00000624741 174 ntBASIC4.23□□□□□ -1.73
RXRBP28702 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RXRBP28702 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.22□□□□□ -1.73
RXRBP28702 U8.2-201ENST00000363156 134 ntBASIC4.22□□□□□ -1.73
RXRBP28702 RNU6-626P-201ENST00000363354 107 ntBASIC4.22□□□□□ -1.73
RXRBP28702 Y_RNA.217-201ENST00000364214 105 ntBASIC4.22□□□□□ -1.73
RXRBP28702 SNORA7.2-201ENST00000364446 145 ntBASIC4.22□□□□□ -1.73
RXRBP28702 SNORD116-18-201ENST00000383961 92 ntBASIC4.22□□□□□ -1.73
RXRBP28702 RNU6-20P-201ENST00000384106 107 ntBASIC4.22□□□□□ -1.73
RXRBP28702 Y_RNA.497-201ENST00000384447 98 ntBASIC4.22□□□□□ -1.73
RXRBP28702 RNU6-482P-201ENST00000391068 107 ntBASIC4.22□□□□□ -1.73
RXRBP28702 Z98941.1-201ENST00000407764 100 ntBASIC4.22□□□□□ -1.73
RXRBP28702 RHEBP3-201ENST00000411920 351 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.22□□□□□ -1.73
RXRBP28702 AC007560.1-201ENST00000426912 237 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AL078601.1-201ENST00000444542 271 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AC007395.1-201ENST00000451333 677 ntBASIC4.22□□□□□ -1.73
RXRBP28702 Y_RNA.641-201ENST00000459414 105 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AC078817.1-201ENST00000492623 435 ntBASIC4.22□□□□□ -1.73
RXRBP28702 RPL23AP49-201ENST00000492925 468 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AC091874.1-201ENST00000511402 339 ntBASIC4.22□□□□□ -1.73
RXRBP28702 RNA5SP24-201ENST00000516478 95 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.22□□□□□ -1.73
RXRBP28702 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.22□□□□□ -1.73
RXRBP28702 AC004825.2-201ENST00000616634 455 ntBASIC4.22□□□□□ -1.73
RXRBP28702 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.22□□□□□ -1.73
RXRBP28702 AC241585.2-209ENST00000638217 143 ntBASIC4.22□□□□□ -1.73
RXRBP28702 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RXRBP28702 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RXRBP28702 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
RXRBP28702 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RXRBP28702 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RXRBP28702 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RXRBP28702 RNU6-653P-201ENST00000363074 106 ntBASIC4.21□□□□□ -1.74
RXRBP28702 RNU6-281P-201ENST00000384212 103 ntBASIC4.21□□□□□ -1.74
RXRBP28702 MIR10B-201ENST00000385011 110 ntBASIC4.21□□□□□ -1.74
RXRBP28702 MIR1290-201ENST00000408735 78 ntBASIC4.21□□□□□ -1.74
RXRBP28702 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.21□□□□□ -1.74
RXRBP28702 NDUFB4P7-201ENST00000423198 363 ntBASIC4.21□□□□□ -1.74
RXRBP28702 AL162725.1-201ENST00000435405 301 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms