Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.25□□□□□ -2.05
CDH3P22223 U4atac.1-201ENST00000618345 95 ntBASIC2.25□□□□□ -2.05
CDH3P22223 SNORA43.4-201ENST00000629559 138 ntBASIC2.25□□□□□ -2.05
CDH3P22223 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
CDH3P22223 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
CDH3P22223 CBX3P9-201ENST00000402326 552 ntBASIC2.24□□□□□ -2.05
CDH3P22223 MIR548K-201ENST00000408406 116 ntBASIC2.24□□□□□ -2.05
CDH3P22223 HMGB3P2-201ENST00000411913 584 ntBASIC2.24□□□□□ -2.05
CDH3P22223 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDH3P22223 Z98742.3-201ENST00000418637 326 ntBASIC2.24□□□□□ -2.05
CDH3P22223 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH3P22223 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH3P22223 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH3P22223 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH3P22223 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH3P22223 AC008549.1-201ENST00000512900 643 ntBASIC2.24□□□□□ -2.05
CDH3P22223 RNU5F-2P-201ENST00000516066 82 ntBASIC2.24□□□□□ -2.05
CDH3P22223 MIR514B-201ENST00000516774 80 ntBASIC2.24□□□□□ -2.05
CDH3P22223 HSPE1P4-201ENST00000550617 308 ntBASIC2.24□□□□□ -2.05
CDH3P22223 MIR4790-201ENST00000577799 79 ntBASIC2.24□□□□□ -2.05
CDH3P22223 AC005730.3-201ENST00000583067 366 ntBASIC2.24□□□□□ -2.05
CDH3P22223 MIR3976-201ENST00000606807 139 ntBASIC2.24□□□□□ -2.05
CDH3P22223 AL355073.2-201ENST00000612106 557 ntBASIC2.24□□□□□ -2.05
CDH3P22223 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.24□□□□□ -2.05
CDH3P22223 AL450472.1-202ENST00000637286 180 ntBASIC2.24□□□□□ -2.05
CDH3P22223 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDH3P22223 U8.2-201ENST00000363156 134 ntBASIC2.23□□□□□ -2.05
CDH3P22223 Y_RNA.339-201ENST00000365325 102 ntBASIC2.23□□□□□ -2.05
CDH3P22223 MIR517A-201ENST00000385001 87 ntBASIC2.23□□□□□ -2.05
CDH3P22223 RNA5SP425-201ENST00000410336 112 ntBASIC2.23□□□□□ -2.05
CDH3P22223 RN7SKP158-201ENST00000410453 326 ntBASIC2.23□□□□□ -2.05
CDH3P22223 RN7SKP61-201ENST00000410642 295 ntBASIC2.23□□□□□ -2.05
CDH3P22223 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
CDH3P22223 AL133396.1-201ENST00000432048 687 ntBASIC2.23□□□□□ -2.05
CDH3P22223 AC244670.1-201ENST00000436879 112 ntBASIC2.23□□□□□ -2.05
CDH3P22223 HMGB1P18-201ENST00000438801 619 ntBASIC2.23□□□□□ -2.05
CDH3P22223 AL353752.1-201ENST00000454946 260 ntBASIC2.23□□□□□ -2.05
CDH3P22223 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
CDH3P22223 AC103851.1-201ENST00000506833 274 ntBASIC2.23□□□□□ -2.05
CDH3P22223 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH3P22223 AC078795.3-201ENST00000602913 472 ntBASIC2.23□□□□□ -2.05
CDH3P22223 ZNF658B-202ENST00000615961 3375 ntBASIC2.23□□□□□ -2.05
CDH3P22223 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH3P22223 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RNU6-1032P-201ENST00000384100 107 ntBASIC2.22□□□□□ -2.05
CDH3P22223 SNORA70B-201ENST00000384210 135 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RNU6-933P-201ENST00000384424 107 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RNU6-306P-201ENST00000384617 107 ntBASIC2.22□□□□□ -2.05
CDH3P22223 SNORA26.3-201ENST00000391119 136 ntBASIC2.22□□□□□ -2.05
CDH3P22223 SNORA3.2-201ENST00000408221 125 ntBASIC2.22□□□□□ -2.05
CDH3P22223 MIR548F5-201ENST00000408421 86 ntBASIC2.22□□□□□ -2.05
CDH3P22223 OOSP1P1-201ENST00000423265 274 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH3P22223 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH3P22223 AL356320.1-201ENST00000429616 163 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
CDH3P22223 MTATP6P23-201ENST00000440153 476 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AL353705.4-201ENST00000449661 238 ntBASIC2.22□□□□□ -2.05
CDH3P22223 PCMTD1P1-201ENST00000455560 355 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AC068781.1-201ENST00000488231 618 ntBASIC2.22□□□□□ -2.05
CDH3P22223 HMGB1P35-201ENST00000503360 598 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH3P22223 SNORA31.16-201ENST00000516773 139 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.22□□□□□ -2.05
CDH3P22223 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH3P22223 AC115990.1-201ENST00000526957 301 ntBASIC2.22□□□□□ -2.05
CDH3P22223 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH3P22223 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH3P22223 MIR8076-201ENST00000611401 83 ntBASIC2.22□□□□□ -2.05
CDH3P22223 uc_338.5-201ENST00000611839 155 ntBASIC2.22□□□□□ -2.05
CDH3P22223 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.22□□□□□ -2.05
CDH3P22223 SDR42E1P4-201ENST00000620894 481 ntBASIC2.22□□□□□ -2.05
CDH3P22223 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AP000553.5-201ENST00000641933 54 ntBASIC2.22□□□□□ -2.05
CDH3P22223 AP000560.1-201ENST00000624150 1937 ntBASIC2.22□□□□□ -2.05
CDH3P22223 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CDH3P22223 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CDH3P22223 AC009541.1-201ENST00000438279 2662 ntBASIC2.21□□□□□ -2.06
CDH3P22223 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH3P22223 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
CDH3P22223 SNORA36A-201ENST00000384221 132 ntBASIC2.21□□□□□ -2.06
CDH3P22223 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
CDH3P22223 RNU6-790P-201ENST00000384479 105 ntBASIC2.21□□□□□ -2.06
CDH3P22223 MIR521-1-201ENST00000384902 87 ntBASIC2.21□□□□□ -2.06
CDH3P22223 BTF3L4P2-201ENST00000392798 346 ntBASIC2.21□□□□□ -2.06
CDH3P22223 AL356432.1-201ENST00000405809 419 ntBASIC2.21□□□□□ -2.06
CDH3P22223 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.21□□□□□ -2.06
CDH3P22223 AL139396.1-201ENST00000421137 167 ntBASIC2.21□□□□□ -2.06
CDH3P22223 AC078809.1-201ENST00000427601 140 ntBASIC2.21□□□□□ -2.06
CDH3P22223 Y_RNA.691-201ENST00000516611 103 ntBASIC2.21□□□□□ -2.06
CDH3P22223 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH3P22223 IMMP1LP2-201ENST00000552954 492 ntBASIC2.21□□□□□ -2.06
CDH3P22223 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH3P22223 MIR3945-201ENST00000581853 98 ntBASIC2.21□□□□□ -2.06
CDH3P22223 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
CDH3P22223 AC007229.1-201ENST00000590455 412 ntBASIC2.21□□□□□ -2.06
CDH3P22223 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.21□□□□□ -2.06
CDH3P22223 AL078605.1-201ENST00000603529 500 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms