Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A1P20908 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A1P20908 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A1P20908 AC004805.2-201ENST00000605382 482 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC091895.1-201ENST00000624494 256 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL5A1P20908 AC121333.1-201ENST00000567488 2709 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 Y_RNA.166-201ENST00000363730 102 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-395P-201ENST00000365662 106 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-1106P-201ENST00000390845 107 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 MTND3P8-201ENST00000412909 339 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 SNRPEP9-201ENST00000436794 238 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 BRK1P2-201ENST00000442875 223 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A1P20908 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.38□□□□□ -2.19
COL5A1P20908 RNU7-138P-201ENST00000459479 64 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC117503.1-201ENST00000472241 394 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AL049874.1-201ENST00000489560 388 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 HMGB1P30-201ENST00000492455 606 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 MTCO1P29-201ENST00000496868 288 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC103851.1-201ENST00000506833 274 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-835P-201ENST00000516974 104 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 SNORD19.2-201ENST00000516978 73 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC009902.1-201ENST00000519351 183 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A1P20908 AL118558.2-201ENST00000556294 238 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
COL5A1P20908 AC090616.3-201ENST00000582184 217 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC091135.1-201ENST00000585943 307 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AL031601.2-202ENST00000622650 282 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC112487.2-201ENST00000637950 304 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
COL5A1P20908 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A1P20908 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL5A1P20908 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
COL5A1P20908 NACAP2-201ENST00000318548 624 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MIR412-201ENST00000362142 91 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 Y_RNA.2-201ENST00000362330 96 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 Y_RNA.301-201ENST00000364990 103 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RNU6-140P-201ENST00000384566 108 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RNU6-817P-201ENST00000391083 104 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RNU6-876P-201ENST00000391295 104 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RAP1BP3-201ENST00000407180 549 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 SNORD23.1-201ENST00000408212 104 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RNU2-33P-201ENST00000410344 192 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AL353621.1-201ENST00000418219 243 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AL591212.2-201ENST00000433923 257 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.37□□□□□ -2.19
COL5A1P20908 AL445687.1-201ENST00000439946 251 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC009296.1-201ENST00000443146 155 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 PRPS1P1-201ENST00000445305 876 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A1P20908 RNA5SP310-201ENST00000459084 116 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 snoU13.28-201ENST00000459235 104 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC007547.1-201ENST00000462177 490 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC006512.1-201ENST00000468816 291 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MTND3P22-201ENST00000510932 243 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MIR892C-201ENST00000516410 77 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 SNORA20.3-201ENST00000516880 132 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 RNA5SP291-201ENST00000517222 105 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
COL5A1P20908 AC005668.1-201ENST00000571142 476 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MIR4782-201ENST00000577987 79 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MIR5583-1-201ENST00000580941 59 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 MIR4742-201ENST00000581069 85 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC060780.3-201ENST00000589464 80 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC092747.3-201ENST00000603769 301 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC103705.1-201ENST00000619013 241 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC027309.3-201ENST00000623419 351 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 AC012640.5-201ENST00000623897 319 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.37□□□□□ -2.19
COL5A1P20908 Z99571.1-201ENST00000636677 394 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
COL5A1P20908 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.37□□□□□ -2.19
COL5A1P20908 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL5A1P20908 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL5A1P20908 Y_RNA.61-201ENST00000362835 102 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-942P-201ENST00000363002 107 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-254P-201ENST00000363377 107 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 Y_RNA.339-201ENST00000365325 102 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 Y_RNA.373-201ENST00000365600 103 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 Y_RNA.529-201ENST00000384586 119 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNORD73A-201ENST00000386062 65 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-1025P-201ENST00000410629 104 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 Y_RNA.623-201ENST00000411128 95 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU2-32P-201ENST00000411193 191 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU6-607P-201ENST00000411283 108 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC098614.2-201ENST00000426040 255 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AL078601.1-201ENST00000444542 271 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 RNU7-180P-201ENST00000459240 63 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.36□□□□□ -2.19
COL5A1P20908 AC023824.2-201ENST00000566185 400 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 MIR5692C1-201ENST00000585309 91 ntBASIC1.36□□□□□ -2.19
COL5A1P20908 FAM106DP-201ENST00000586416 501 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms