Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.89□□□□□ -1.79
NID1P14543 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.89□□□□□ -1.79
NID1P14543 AL139281.1-201ENST00000422120 335 ntBASIC3.89□□□□□ -1.79
NID1P14543 AC027124.2-201ENST00000428249 105 ntBASIC3.89□□□□□ -1.79
NID1P14543 SNORD108-201ENST00000459332 71 ntBASIC3.89□□□□□ -1.79
NID1P14543 RN7SL303P-201ENST00000469773 251 ntBASIC3.89□□□□□ -1.79
NID1P14543 RPS29P19-201ENST00000479709 171 ntBASIC3.89□□□□□ -1.79
NID1P14543 AC117454.1-201ENST00000491120 168 ntBASIC3.89□□□□□ -1.79
NID1P14543 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.89□□□□□ -1.79
NID1P14543 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.89□□□□□ -1.79
NID1P14543 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NID1P14543 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.89□□□□□ -1.79
NID1P14543 MIR5006-201ENST00000583027 110 ntBASIC3.89□□□□□ -1.79
NID1P14543 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NID1P14543 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NID1P14543 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NID1P14543 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
NID1P14543 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NID1P14543 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NID1P14543 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NID1P14543 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NID1P14543 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NID1P14543 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.88□□□□□ -1.79
NID1P14543 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NID1P14543 SNORA36B-201ENST00000410438 131 ntBASIC3.88□□□□□ -1.79
NID1P14543 AL691449.1-201ENST00000426570 421 ntBASIC3.88□□□□□ -1.79
NID1P14543 S100A11P1-201ENST00000477525 312 ntBASIC3.88□□□□□ -1.79
NID1P14543 VWA8P1-201ENST00000510889 176 ntBASIC3.88□□□□□ -1.79
NID1P14543 RNU7-115P-201ENST00000516433 55 ntBASIC3.88□□□□□ -1.79
NID1P14543 RNU2-60P-201ENST00000517290 128 ntBASIC3.88□□□□□ -1.79
NID1P14543 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 AC021739.1-201ENST00000559631 174 ntBASIC3.88□□□□□ -1.79
NID1P14543 AC105137.2-201ENST00000569073 466 ntBASIC3.88□□□□□ -1.79
NID1P14543 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 AC099778.2-201ENST00000610904 211 ntBASIC3.88□□□□□ -1.79
NID1P14543 PCGEM1.1-201ENST00000613431 131 ntBASIC3.88□□□□□ -1.79
NID1P14543 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NID1P14543 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.88□□□□□ -1.79
NID1P14543 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NID1P14543 FAM35BP-202ENST00000497389 3337 ntBASIC3.88□□□□□ -1.79
NID1P14543 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NID1P14543 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NID1P14543 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NID1P14543 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
NID1P14543 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.87□□□□□ -1.79
NID1P14543 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NID1P14543 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NID1P14543 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.87□□□□□ -1.79
NID1P14543 RNU1-75P-201ENST00000347264 129 ntBASIC3.87□□□□□ -1.79
NID1P14543 RNA5SP201-201ENST00000410316 124 ntBASIC3.87□□□□□ -1.79
NID1P14543 AL353748.1-201ENST00000440753 474 ntBASIC3.87□□□□□ -1.79
NID1P14543 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.87□□□□□ -1.79
NID1P14543 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.87□□□□□ -1.79
NID1P14543 SNRPGP8-201ENST00000454064 226 ntBASIC3.87□□□□□ -1.79
NID1P14543 RPS4XP2-201ENST00000458402 793 ntBASIC3.87□□□□□ -1.79
NID1P14543 RN7SL132P-201ENST00000478131 296 ntBASIC3.87□□□□□ -1.79
NID1P14543 SRIP1-201ENST00000489235 288 ntBASIC3.87□□□□□ -1.79
NID1P14543 AC025445.1-201ENST00000502728 300 ntBASIC3.87□□□□□ -1.79
NID1P14543 RNA5SP49-201ENST00000516450 115 ntBASIC3.87□□□□□ -1.79
NID1P14543 MIR2116-201ENST00000517221 80 ntBASIC3.87□□□□□ -1.79
NID1P14543 AC023632.4-201ENST00000517783 191 ntBASIC3.87□□□□□ -1.79
NID1P14543 EIF4A1P12-201ENST00000551910 141 ntBASIC3.87□□□□□ -1.79
NID1P14543 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NID1P14543 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NID1P14543 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NID1P14543 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 AL513302.2-201ENST00000562313 1842 ntBASIC3.86□□□□□ -1.79
NID1P14543 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.86□□□□□ -1.79
NID1P14543 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.86□□□□□ -1.79
NID1P14543 AC018555.1-201ENST00000567548 1980 ntBASIC3.86□□□□□ -1.79
NID1P14543 U3.8-201ENST00000363675 217 ntBASIC3.86□□□□□ -1.79
NID1P14543 RNU6-647P-201ENST00000364243 107 ntBASIC3.86□□□□□ -1.79
NID1P14543 RNU6-1164P-201ENST00000364428 107 ntBASIC3.86□□□□□ -1.79
NID1P14543 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.86□□□□□ -1.79
NID1P14543 AP002088.1-201ENST00000382740 395 ntBASIC3.86□□□□□ -1.79
NID1P14543 MIR93-201ENST00000385024 80 ntBASIC3.86□□□□□ -1.79
NID1P14543 MIR513A2-201ENST00000385249 127 ntBASIC3.86□□□□□ -1.79
NID1P14543 RPL23AP46-201ENST00000438548 490 ntBASIC3.86□□□□□ -1.79
NID1P14543 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.86□□□□□ -1.79
NID1P14543 AC105137.1-201ENST00000484355 562 ntBASIC3.86□□□□□ -1.79
NID1P14543 RPS29P20-201ENST00000489592 171 ntBASIC3.86□□□□□ -1.79
NID1P14543 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.86□□□□□ -1.79
NID1P14543 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.86□□□□□ -1.79
NID1P14543 RNA5SP519-201ENST00000516480 119 ntBASIC3.86□□□□□ -1.79
NID1P14543 RNU6-197P-201ENST00000516680 100 ntBASIC3.86□□□□□ -1.79
NID1P14543 HSPE1P5-201ENST00000561489 272 ntBASIC3.86□□□□□ -1.79
NID1P14543 uc_338.28-201ENST00000612082 187 ntBASIC3.86□□□□□ -1.79
NID1P14543 MIR3653-201ENST00000625572 110 ntBASIC3.86□□□□□ -1.79
NID1P14543 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NID1P14543 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NID1P14543 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms