Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCNAP12004 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
PCNAP12004 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.54□□□□□ -2
PCNAP12004 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
PCNAP12004 AC021146.2-201ENST00000504736 556 ntBASIC2.54□□□□□ -2
PCNAP12004 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.54□□□□□ -2
PCNAP12004 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.54□□□□□ -2
PCNAP12004 AL034555.1-201ENST00000604816 211 ntBASIC2.54□□□□□ -2
PCNAP12004 AL356157.2-201ENST00000605122 111 ntBASIC2.54□□□□□ -2
PCNAP12004 AC005014.2-201ENST00000607795 599 ntBASIC2.54□□□□□ -2
PCNAP12004 AC126177.8-201ENST00000618339 1015 ntBASIC2.54□□□□□ -2
PCNAP12004 MIR7157-201ENST00000635801 60 ntBASIC2.54□□□□□ -2
PCNAP12004 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
PCNAP12004 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCNAP12004 AC233981.2-201ENST00000611524 1614 ntBASIC2.53□□□□□ -2
PCNAP12004 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCNAP12004 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.53□□□□□ -2
PCNAP12004 RNU6-596P-201ENST00000365395 98 ntBASIC2.53□□□□□ -2
PCNAP12004 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
PCNAP12004 MIR487A-201ENST00000385009 80 ntBASIC2.53□□□□□ -2
PCNAP12004 MIR483-201ENST00000385070 76 ntBASIC2.53□□□□□ -2
PCNAP12004 Y_RNA.579-201ENST00000390939 94 ntBASIC2.53□□□□□ -2
PCNAP12004 AC096664.2-201ENST00000411843 406 ntBASIC2.53□□□□□ -2
PCNAP12004 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.53□□□□□ -2
PCNAP12004 MTCO2P27-201ENST00000420740 428 ntBASIC2.53□□□□□ -2
PCNAP12004 AC243428.1-201ENST00000421099 264 ntBASIC2.53□□□□□ -2
PCNAP12004 EIF4EP2-201ENST00000422816 654 ntBASIC2.53□□□□□ -2
PCNAP12004 AC078809.1-201ENST00000427601 140 ntBASIC2.53□□□□□ -2
PCNAP12004 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.53□□□□□ -2
PCNAP12004 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.53□□□□□ -2
PCNAP12004 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.53□□□□□ -2
PCNAP12004 RPL23AP50-201ENST00000434149 455 ntBASIC2.53□□□□□ -2
PCNAP12004 AC107083.1-201ENST00000439643 279 ntBASIC2.53□□□□□ -2
PCNAP12004 AL353705.4-201ENST00000449661 238 ntBASIC2.53□□□□□ -2
PCNAP12004 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.53□□□□□ -2
PCNAP12004 MIR2053-201ENST00000459295 91 ntBASIC2.53□□□□□ -2
PCNAP12004 AC022447.4-201ENST00000504053 364 ntBASIC2.53□□□□□ -2
PCNAP12004 AC097473.1-201ENST00000508142 408 ntBASIC2.53□□□□□ -2
PCNAP12004 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
PCNAP12004 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.53□□□□□ -2
PCNAP12004 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
PCNAP12004 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.53□□□□□ -2
PCNAP12004 MIR5696-201ENST00000578474 85 ntBASIC2.53□□□□□ -2
PCNAP12004 AL713866.2-201ENST00000603579 219 ntBASIC2.53□□□□□ -2
PCNAP12004 AC069294.1-201ENST00000608397 350 ntBASIC2.53□□□□□ -2
PCNAP12004 AC090517.3-201ENST00000625170 141 ntBASIC2.53□□□□□ -2
PCNAP12004 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PCNAP12004 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
PCNAP12004 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
PCNAP12004 SNORA26.3-201ENST00000391119 136 ntBASIC2.52□□□□□ -2.01
PCNAP12004 U6atac.2-201ENST00000408644 118 ntBASIC2.52□□□□□ -2.01
PCNAP12004 EIF1AXP1-201ENST00000419267 435 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.52□□□□□ -2.01
PCNAP12004 AL358453.1-201ENST00000422522 250 ntBASIC2.52□□□□□ -2.01
PCNAP12004 MTCO3P29-201ENST00000432119 779 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AC236972.2-201ENST00000434979 310 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AL513124.1-201ENST00000450410 614 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AL139109.1-201ENST00000455491 297 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.52□□□□□ -2.01
PCNAP12004 RPL23AP75-201ENST00000491601 451 ntBASIC2.52□□□□□ -2.01
PCNAP12004 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
PCNAP12004 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AC115990.1-201ENST00000526957 301 ntBASIC2.52□□□□□ -2.01
PCNAP12004 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
PCNAP12004 MIR5571-201ENST00000577998 113 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AC010928.2-201ENST00000588017 287 ntBASIC2.52□□□□□ -2.01
PCNAP12004 ELOCP29-201ENST00000588193 334 ntBASIC2.52□□□□□ -2.01
PCNAP12004 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PCNAP12004 Z98751.3-201ENST00000604447 521 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AC245884.12-201ENST00000615364 59 ntBASIC2.52□□□□□ -2.01
PCNAP12004 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCNAP12004 AP000560.1-201ENST00000624150 1937 ntBASIC2.52□□□□□ -2.01
PCNAP12004 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.51□□□□□ -2.01
PCNAP12004 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCNAP12004 AC092268.1-201ENST00000342691 405 ntBASIC2.51□□□□□ -2.01
PCNAP12004 RNU4-15P-201ENST00000362613 141 ntBASIC2.51□□□□□ -2.01
PCNAP12004 RNU5B-2P-201ENST00000363036 113 ntBASIC2.51□□□□□ -2.01
PCNAP12004 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
PCNAP12004 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
PCNAP12004 CBX3P9-201ENST00000402326 552 ntBASIC2.51□□□□□ -2.01
PCNAP12004 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
PCNAP12004 Z92545.1-201ENST00000411782 234 ntBASIC2.51□□□□□ -2.01
PCNAP12004 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.51□□□□□ -2.01
PCNAP12004 IPO7P1-201ENST00000442031 636 ntBASIC2.51□□□□□ -2.01
PCNAP12004 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
PCNAP12004 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
PCNAP12004 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
PCNAP12004 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
PCNAP12004 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
PCNAP12004 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.51□□□□□ -2.01
PCNAP12004 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.51□□□□□ -2.01
PCNAP12004 GTF3AP2-201ENST00000557014 266 ntBASIC2.51□□□□□ -2.01
PCNAP12004 AC009127.3-201ENST00000570531 403 ntBASIC2.51□□□□□ -2.01
PCNAP12004 LARP7P3-201ENST00000579888 337 ntBASIC2.51□□□□□ -2.01
PCNAP12004 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.51□□□□□ -2.01
PCNAP12004 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.51□□□□□ -2.01
PCNAP12004 AC022140.2-201ENST00000623500 188 ntBASIC2.51□□□□□ -2.01
PCNAP12004 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.51□□□□□ -2.01
PCNAP12004 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCNAP12004 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms