Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.22□□□□□ -1.73
NEFMP07197 MIR4782-201ENST00000577987 79 ntBASIC4.22□□□□□ -1.73
NEFMP07197 MIR2682-201ENST00000580305 110 ntBASIC4.22□□□□□ -1.73
NEFMP07197 MIR3200-201ENST00000580767 85 ntBASIC4.22□□□□□ -1.73
NEFMP07197 AC012493.2-201ENST00000595083 291 ntBASIC4.22□□□□□ -1.73
NEFMP07197 RPL23AP88-201ENST00000605759 454 ntBASIC4.22□□□□□ -1.73
NEFMP07197 SNORD113-5-201ENST00000607261 78 ntBASIC4.22□□□□□ -1.73
NEFMP07197 AL110115.1-201ENST00000614396 364 ntBASIC4.22□□□□□ -1.73
NEFMP07197 AC011476.5-201ENST00000615594 130 ntBASIC4.22□□□□□ -1.73
NEFMP07197 AC018692.3-201ENST00000623929 123 ntBASIC4.22□□□□□ -1.73
NEFMP07197 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.22□□□□□ -1.73
NEFMP07197 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEFMP07197 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NEFMP07197 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.21□□□□□ -1.73
NEFMP07197 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEFMP07197 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NEFMP07197 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEFMP07197 RNU6-222P-201ENST00000362438 107 ntBASIC4.21□□□□□ -1.74
NEFMP07197 DYNLT3P1-201ENST00000378574 347 ntBASIC4.21□□□□□ -1.74
NEFMP07197 RNU6-843P-201ENST00000384454 104 ntBASIC4.21□□□□□ -1.74
NEFMP07197 MIR483-201ENST00000385070 76 ntBASIC4.21□□□□□ -1.74
NEFMP07197 MIR548I2-201ENST00000408348 149 ntBASIC4.21□□□□□ -1.74
NEFMP07197 SNRPEP9-201ENST00000436794 238 ntBASIC4.21□□□□□ -1.74
NEFMP07197 Z82210.1-201ENST00000440037 231 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC016700.2-201ENST00000446011 156 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AL353705.4-201ENST00000449661 238 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC115115.1-201ENST00000449927 248 ntBASIC4.21□□□□□ -1.74
NEFMP07197 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.21□□□□□ -1.74
NEFMP07197 RPL23AP75-201ENST00000491601 451 ntBASIC4.21□□□□□ -1.74
NEFMP07197 RPL23AP49-201ENST00000492925 468 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC107393.1-201ENST00000512403 346 ntBASIC4.21□□□□□ -1.74
NEFMP07197 MRPS36P4-201ENST00000534436 298 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.21□□□□□ -1.74
NEFMP07197 AC010928.2-201ENST00000588017 287 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC010620.2-201ENST00000600135 313 ntBASIC4.21□□□□□ -1.74
NEFMP07197 MIR8057-201ENST00000620957 69 ntBASIC4.21□□□□□ -1.74
NEFMP07197 U6.99-201ENST00000637524 83 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC132825.6-201ENST00000638861 357 ntBASIC4.21□□□□□ -1.74
NEFMP07197 AC008568.2-201ENST00000623862 2313 ntBASIC4.21□□□□□ -1.74
NEFMP07197 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.2□□□□□ -1.74
NEFMP07197 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.2□□□□□ -1.74
NEFMP07197 RNU6-527P-201ENST00000363425 104 ntBASIC4.2□□□□□ -1.74
NEFMP07197 RNU6-525P-201ENST00000363685 104 ntBASIC4.2□□□□□ -1.74
NEFMP07197 RNU6-1286P-201ENST00000383871 107 ntBASIC4.2□□□□□ -1.74
NEFMP07197 MIR153-2-201ENST00000385225 87 ntBASIC4.2□□□□□ -1.74
NEFMP07197 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NEFMP07197 RNU1-139P-201ENST00000391307 165 ntBASIC4.2□□□□□ -1.74
NEFMP07197 U3.37-201ENST00000408528 213 ntBASIC4.2□□□□□ -1.74
NEFMP07197 RNU6-1077P-201ENST00000410506 102 ntBASIC4.2□□□□□ -1.74
NEFMP07197 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.2□□□□□ -1.74
NEFMP07197 RPS15AP7-201ENST00000439294 405 ntBASIC4.2□□□□□ -1.74
NEFMP07197 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.2□□□□□ -1.74
NEFMP07197 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.2□□□□□ -1.74
NEFMP07197 SNORA31.8-201ENST00000516327 108 ntBASIC4.2□□□□□ -1.74
NEFMP07197 SNORA70.16-201ENST00000516390 95 ntBASIC4.2□□□□□ -1.74
NEFMP07197 RNU2-31P-201ENST00000516954 155 ntBASIC4.2□□□□□ -1.74
NEFMP07197 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.2□□□□□ -1.74
NEFMP07197 AP004607.1-201ENST00000524456 203 ntBASIC4.2□□□□□ -1.74
NEFMP07197 AC024153.1-201ENST00000603103 365 ntBASIC4.2□□□□□ -1.74
NEFMP07197 AC073476.4-201ENST00000628409 72 ntBASIC4.2□□□□□ -1.74
NEFMP07197 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEFMP07197 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.19□□□□□ -1.74
NEFMP07197 Y_RNA.76-201ENST00000362931 109 ntBASIC4.19□□□□□ -1.74
NEFMP07197 RNU6-879P-201ENST00000364328 108 ntBASIC4.19□□□□□ -1.74
NEFMP07197 RNU6-125P-201ENST00000384505 107 ntBASIC4.19□□□□□ -1.74
NEFMP07197 SNORD15B-201ENST00000384714 146 ntBASIC4.19□□□□□ -1.74
NEFMP07197 Y_RNA.626-201ENST00000411288 95 ntBASIC4.19□□□□□ -1.74
NEFMP07197 EIF1P2-201ENST00000428233 350 ntBASIC4.19□□□□□ -1.74
NEFMP07197 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.19□□□□□ -1.74
NEFMP07197 AC005002.2-201ENST00000438228 269 ntBASIC4.19□□□□□ -1.74
NEFMP07197 AC009237.8-201ENST00000445492 379 ntBASIC4.19□□□□□ -1.74
NEFMP07197 MRPL42P6-201ENST00000486397 371 ntBASIC4.19□□□□□ -1.74
NEFMP07197 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.19□□□□□ -1.74
NEFMP07197 RNU6-1114P-201ENST00000516022 107 ntBASIC4.19□□□□□ -1.74
NEFMP07197 SNORA43.2-201ENST00000516652 128 ntBASIC4.19□□□□□ -1.74
NEFMP07197 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.19□□□□□ -1.74
NEFMP07197 AC087441.2-201ENST00000529141 262 ntBASIC4.19□□□□□ -1.74
NEFMP07197 AL162424.1-201ENST00000602325 221 ntBASIC4.19□□□□□ -1.74
NEFMP07197 AC136601.2-201ENST00000604356 474 ntBASIC4.19□□□□□ -1.74
NEFMP07197 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEFMP07197 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.19□□□□□ -1.74
NEFMP07197 AL353743.1-202ENST00000431724 1695 ntBASIC4.19□□□□□ -1.74
NEFMP07197 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NEFMP07197 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
NEFMP07197 RNU6-682P-201ENST00000363843 106 ntBASIC4.18□□□□□ -1.74
NEFMP07197 Y_RNA.506-201ENST00000384494 102 ntBASIC4.18□□□□□ -1.74
NEFMP07197 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.18□□□□□ -1.74
NEFMP07197 RNU5A-5P-201ENST00000411054 116 ntBASIC4.18□□□□□ -1.74
NEFMP07197 CYCSP32-201ENST00000440548 321 ntBASIC4.18□□□□□ -1.74
NEFMP07197 TMSB4XP3-201ENST00000445144 114 ntBASIC4.18□□□□□ -1.74
NEFMP07197 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.18□□□□□ -1.74
NEFMP07197 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.18□□□□□ -1.74
NEFMP07197 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.18□□□□□ -1.74
NEFMP07197 AC072026.1-201ENST00000605023 201 ntBASIC4.18□□□□□ -1.74
NEFMP07197 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.18□□□□□ -1.74
NEFMP07197 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.18□□□□□ -1.74
NEFMP07197 AC241585.2-209ENST00000638217 143 ntBASIC4.18□□□□□ -1.74
NEFMP07197 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NEFMP07197 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.18□□□□□ -1.74
NEFMP07197 AC009487.2-201ENST00000420969 6821 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms