Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC069528.2-201ENST00000624849 1991 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ALDH1A1P00352 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 U1.1-201ENST00000384101 164 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 U6atac.2-201ENST00000408644 118 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 MIR1278-201ENST00000408753 81 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 AL591419.1-201ENST00000427423 339 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 SNRPGP8-201ENST00000454064 226 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 AL133162.1-201ENST00000463228 453 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 AC103975.1-201ENST00000482506 483 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 AC108145.1-201ENST00000503770 153 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 RNA5SP179-201ENST00000517284 121 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 SCARNA15.3-201ENST00000626315 122 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 SCARNA4.1-201ENST00000628597 123 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ALDH1A1P00352 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ALDH1A1P00352 NOL8P1-201ENST00000508336 3529 ntBASIC4.62□□□□□ -1.67
ALDH1A1P00352 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 RNU6-647P-201ENST00000364243 107 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 RNU6-49P-201ENST00000384256 107 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 SNORD72-201ENST00000390994 80 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 Y_RNA.622-201ENST00000411091 108 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 RPS26P28-201ENST00000470806 348 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 AC090525.1-201ENST00000479116 478 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 RPS29P2-201ENST00000479278 136 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 RN7SKP18-201ENST00000516005 275 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 RN7SKP19-201ENST00000516016 252 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 AP004371.1-201ENST00000525240 214 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 CYP4A27P-201ENST00000567218 190 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 RPL30P11-203ENST00000598995 310 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 AC091167.4-201ENST00000605079 184 ntBASIC4.61□□□□□ -1.67
ALDH1A1P00352 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ALDH1A1P00352 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ALDH1A1P00352 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 AL596211.1-201ENST00000569873 2277 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 RNU6-978P-201ENST00000364371 103 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 RNU6-1131P-201ENST00000364955 107 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 U3.26-201ENST00000391236 204 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 RPL36AP10-201ENST00000421785 322 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.6□□□□□ -1.67
ALDH1A1P00352 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.6□□□□□ -1.67
ALDH1A1P00352 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 AC104619.4-201ENST00000510773 249 ntBASIC4.6□□□□□ -1.67
ALDH1A1P00352 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.6□□□□□ -1.67
ALDH1A1P00352 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.6□□□□□ -1.67
ALDH1A1P00352 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ALDH1A1P00352 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ALDH1A1P00352 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ALDH1A1P00352 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ALDH1A1P00352 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.59□□□□□ -1.67
ALDH1A1P00352 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
ALDH1A1P00352 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
ALDH1A1P00352 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.59□□□□□ -1.67
ALDH1A1P00352 Y_RNA.346-201ENST00000365385 112 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ALDH1A1P00352 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ALDH1A1P00352 RNU1-73P-201ENST00000383971 164 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 AL603914.1-201ENST00000401964 204 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 RPS4XP2-201ENST00000458402 793 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ALDH1A1P00352 YPEL5P3-201ENST00000547227 352 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 MIR4513-201ENST00000581077 86 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 MIR5187-201ENST00000583479 76 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 FTX_3.1-201ENST00000610451 147 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 AP001318.4-201ENST00000616637 121 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 AL049781.1-201ENST00000623195 3585 ntBASIC4.59□□□□□ -1.67
ALDH1A1P00352 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
ALDH1A1P00352 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ALDH1A1P00352 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 SNORD35B-201ENST00000363660 87 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms