Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
MBD3O95983 MIR3945-201ENST00000581853 98 ntBASIC1.67□□□□□ -2.14
MBD3O95983 AC110760.3-201ENST00000598794 467 ntBASIC1.67□□□□□ -2.14
MBD3O95983 AP001330.5-201ENST00000607176 411 ntBASIC1.67□□□□□ -2.14
MBD3O95983 AC064807.4-201ENST00000607201 407 ntBASIC1.67□□□□□ -2.14
MBD3O95983 MIR6715A-201ENST00000615929 79 ntBASIC1.67□□□□□ -2.14
MBD3O95983 AL354950.2-201ENST00000617939 290 ntBASIC1.67□□□□□ -2.14
MBD3O95983 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
MBD3O95983 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MBD3O95983 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
MBD3O95983 Y_RNA.1-201ENST00000352915 104 ntBASIC1.66□□□□□ -2.14
MBD3O95983 SNORA12-201ENST00000391162 147 ntBASIC1.66□□□□□ -2.14
MBD3O95983 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.66□□□□□ -2.14
MBD3O95983 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.66□□□□□ -2.14
MBD3O95983 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.66□□□□□ -2.14
MBD3O95983 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.66□□□□□ -2.14
MBD3O95983 AL121601.2-201ENST00000438019 707 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.66□□□□□ -2.14
MBD3O95983 MTCO1P19-201ENST00000443487 500 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.66□□□□□ -2.14
MBD3O95983 RPL31P3-201ENST00000458430 332 ntBASIC1.66□□□□□ -2.14
MBD3O95983 RPS29P21-201ENST00000496272 170 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC079140.3-201ENST00000511111 550 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
MBD3O95983 SNORA40.12-201ENST00000516329 111 ntBASIC1.66□□□□□ -2.14
MBD3O95983 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC026407.1-201ENST00000518369 204 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.66□□□□□ -2.14
MBD3O95983 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.66□□□□□ -2.14
MBD3O95983 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC078795.3-201ENST00000602913 472 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC007684.1-201ENST00000609671 477 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC009318.2-201ENST00000610917 651 ntBASIC1.66□□□□□ -2.14
MBD3O95983 AC103705.1-201ENST00000619013 241 ntBASIC1.66□□□□□ -2.14
MBD3O95983 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
MBD3O95983 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
MBD3O95983 SNORD114-6-201ENST00000364393 72 ntBASIC1.65□□□□□ -2.15
MBD3O95983 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
MBD3O95983 Y_RNA.296-201ENST00000364930 108 ntBASIC1.65□□□□□ -2.15
MBD3O95983 RNY3P9-201ENST00000384727 106 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AL606923.1-201ENST00000406616 190 ntBASIC1.65□□□□□ -2.15
MBD3O95983 RNA5SP100-201ENST00000410903 110 ntBASIC1.65□□□□□ -2.15
MBD3O95983 RNA5SP59-201ENST00000410922 110 ntBASIC1.65□□□□□ -2.15
MBD3O95983 RNU6-1037P-201ENST00000459571 107 ntBASIC1.65□□□□□ -2.15
MBD3O95983 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.65□□□□□ -2.15
MBD3O95983 YWHAEP4-201ENST00000505390 198 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC010424.1-201ENST00000506336 297 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC091885.1-201ENST00000506658 268 ntBASIC1.65□□□□□ -2.15
MBD3O95983 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.65□□□□□ -2.15
MBD3O95983 Y_RNA.688-201ENST00000516565 95 ntBASIC1.65□□□□□ -2.15
MBD3O95983 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.65□□□□□ -2.15
MBD3O95983 AK6P1-201ENST00000540219 478 ntBASIC1.65□□□□□ -2.15
MBD3O95983 SUB1P4-201ENST00000566062 339 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC109446.1-201ENST00000566172 220 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.65□□□□□ -2.15
MBD3O95983 AC119751.7-201ENST00000600494 245 ntBASIC1.65□□□□□ -2.15
MBD3O95983 Z98751.3-201ENST00000604447 521 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC009994.1-201ENST00000606889 253 ntBASIC1.65□□□□□ -2.15
MBD3O95983 AC245008.1-201ENST00000608123 476 ntBASIC1.65□□□□□ -2.15
MBD3O95983 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.65□□□□□ -2.15
MBD3O95983 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.65□□□□□ -2.15
MBD3O95983 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MBD3O95983 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
MBD3O95983 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
MBD3O95983 AL356292.1-201ENST00000283110 373 ntBASIC1.64□□□□□ -2.15
MBD3O95983 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
MBD3O95983 Y_RNA.481-201ENST00000384373 102 ntBASIC1.64□□□□□ -2.15
MBD3O95983 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
MBD3O95983 MIR1261-201ENST00000408659 82 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.64□□□□□ -2.15
MBD3O95983 AL353193.1-201ENST00000421444 268 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AL121890.1-201ENST00000435457 205 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.64□□□□□ -2.15
MBD3O95983 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.64□□□□□ -2.15
MBD3O95983 SNRPGP7-201ENST00000469016 106 ntBASIC1.64□□□□□ -2.15
MBD3O95983 CCDC34P1-201ENST00000507441 517 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.64□□□□□ -2.15
MBD3O95983 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.64□□□□□ -2.15
MBD3O95983 HSBP1P1-201ENST00000555205 166 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
MBD3O95983 MIR5583-1-201ENST00000580941 59 ntBASIC1.64□□□□□ -2.15
MBD3O95983 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.64□□□□□ -2.15
MBD3O95983 SNORA43.4-201ENST00000629559 138 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.64□□□□□ -2.15
MBD3O95983 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.64□□□□□ -2.15
MBD3O95983 MTND5P9-201ENST00000503854 1755 ntBASIC1.64□□□□□ -2.15
MBD3O95983 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.64□□□□□ -2.15
MBD3O95983 RNU1-76P-201ENST00000362903 159 ntBASIC1.63□□□□□ -2.15
MBD3O95983 SNORD31B-201ENST00000364977 69 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AF228730.1-201ENST00000397972 663 ntBASIC1.63□□□□□ -2.15
MBD3O95983 RNU4-26P-201ENST00000410270 107 ntBASIC1.63□□□□□ -2.15
MBD3O95983 RN7SKP51-201ENST00000410781 304 ntBASIC1.63□□□□□ -2.15
MBD3O95983 MTCO3P41-201ENST00000414801 328 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.63□□□□□ -2.15
MBD3O95983 AC012306.1-201ENST00000423267 114 ntBASIC1.63□□□□□ -2.15
MBD3O95983 AL606489.2-201ENST00000433886 234 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms