Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SNORD31B-201ENST00000364977 69 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 RNU6-946P-201ENST00000383878 107 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 SNORD89-201ENST00000390981 114 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 GXYLT1P1-201ENST00000446657 490 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.2□□□□□ -2.38
ABCA1O95477 RPS26P48-201ENST00000491713 339 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 IGLVI-20-201ENST00000519296 130 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.2□□□□□ -2.38
ABCA1O95477 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AL355816.2-201ENST00000610049 647 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 AL138726.1-201ENST00000614873 333 ntBASIC0.2□□□□□ -2.38
ABCA1O95477 RNU6-30P-201ENST00000384561 107 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 RPS3AP37-201ENST00000419176 745 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 AL365338.1-201ENST00000422282 858 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.19□□□□□ -2.38
ABCA1O95477 HMGN1P12-201ENST00000499125 195 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.19□□□□□ -2.38
ABCA1O95477 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.19□□□□□ -2.38
ABCA1O95477 AC109446.1-201ENST00000566172 220 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 MIR4709-201ENST00000577272 72 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.19□□□□□ -2.38
ABCA1O95477 AL162730.1-201ENST00000605734 292 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 AL353149.1-201ENST00000610667 244 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 CASC19-280ENST00000642102 1351 ntBASIC0.19□□□□□ -2.38
ABCA1O95477 MIR518A1-201ENST00000385068 85 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 MIR548B-201ENST00000385247 97 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 MIR301A-201ENST00000385261 86 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.18□□□□□ -2.38
ABCA1O95477 ELOCP9-201ENST00000418624 239 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 AC092423.1-201ENST00000430165 186 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 MTCO3P28-201ENST00000513351 515 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.18□□□□□ -2.38
ABCA1O95477 SNORD79.1-201ENST00000516069 84 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 RNU6-914P-201ENST00000516749 109 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 SUMO2P18-201ENST00000518873 252 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.18□□□□□ -2.38
ABCA1O95477 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 MTCYBP33-201ENST00000575007 1130 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC092354.1-201ENST00000606057 376 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 RNU6-78P-201ENST00000362897 107 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 RNU6-560P-201ENST00000364007 108 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 RNU6-843P-201ENST00000384454 104 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 Y_RNA.571-201ENST00000384753 98 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 MTCO3P41-201ENST00000414801 328 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC123900.1-201ENST00000420390 96 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 USP9YP21-201ENST00000420603 432 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.18□□□□□ -2.38
ABCA1O95477 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.18□□□□□ -2.38
ABCA1O95477 RPL39P36-201ENST00000490784 156 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC097473.1-201ENST00000508142 408 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.18□□□□□ -2.38
ABCA1O95477 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 RNU4-54P-201ENST00000516428 129 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 AC109810.1-201ENST00000534066 224 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC007834.2-201ENST00000536310 343 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA1O95477 AC022432.1-201ENST00000595739 310 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 DPPA3P3-201ENST00000603842 430 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC018889.1-201ENST00000605372 397 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 AC024060.1-201ENST00000607052 494 ntBASIC0.18□□□□□ -2.38
ABCA1O95477 MIR409-201ENST00000362237 79 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 Y_RNA.142-201ENST00000363491 102 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 SNORD95.1-201ENST00000364099 68 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RAP1BP3-201ENST00000407180 549 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 MTCO3P18-201ENST00000440206 761 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 ART2BP-201ENST00000453501 499 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.17□□□□□ -2.38
ABCA1O95477 AC016925.1-201ENST00000458303 298 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC067940.1-201ENST00000458411 300 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RNU7-90P-201ENST00000459216 62 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 snoU109.2-201ENST00000459316 135 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.17□□□□□ -2.38
ABCA1O95477 MTCO3P7-201ENST00000510008 774 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC027338.1-201ENST00000514840 825 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC090186.1-201ENST00000605991 572 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.17□□□□□ -2.38
ABCA1O95477 AC090625.1-201ENST00000357130 210 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RNU4-73P-201ENST00000363164 141 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RNU6-236P-201ENST00000363886 106 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 PDCL2P1-201ENST00000419302 352 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 TXNL1P1-201ENST00000429528 554 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 USP9YP14-201ENST00000430663 563 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RPL37P21-201ENST00000435890 276 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC104629.1-201ENST00000494226 508 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC119751.4-201ENST00000507498 357 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 Y_RNA.689-201ENST00000516589 107 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 RNU6-197P-201ENST00000516680 100 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC078795.2-201ENST00000602835 1252 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 MTATP6P2-201ENST00000603319 678 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 SEPT14P17-201ENST00000617978 177 ntBASIC0.17□□□□□ -2.38
ABCA1O95477 AC136475.10-201ENST00000620253 385 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms