Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.27□□□□□ -2.05
BEST1O76090 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
BEST1O76090 AC109446.1-201ENST00000566172 220 ntBASIC2.27□□□□□ -2.05
BEST1O76090 MIR4648-201ENST00000580107 72 ntBASIC2.27□□□□□ -2.05
BEST1O76090 CTHRC1P1-201ENST00000605383 469 ntBASIC2.27□□□□□ -2.05
BEST1O76090 MIR8076-201ENST00000611401 83 ntBASIC2.27□□□□□ -2.05
BEST1O76090 MIR3688-2-201ENST00000636963 87 ntBASIC2.27□□□□□ -2.05
BEST1O76090 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
BEST1O76090 Y_RNA.295-201ENST00000364918 102 ntBASIC2.26□□□□□ -2.05
BEST1O76090 MIR1262-201ENST00000408276 93 ntBASIC2.26□□□□□ -2.05
BEST1O76090 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
BEST1O76090 AC009161.1-201ENST00000417306 376 ntBASIC2.26□□□□□ -2.05
BEST1O76090 C8orf59P1-201ENST00000429930 303 ntBASIC2.26□□□□□ -2.05
BEST1O76090 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.26□□□□□ -2.05
BEST1O76090 AC093259.1-201ENST00000509755 300 ntBASIC2.26□□□□□ -2.05
BEST1O76090 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
BEST1O76090 AC087241.2-201ENST00000535801 324 ntBASIC2.26□□□□□ -2.05
BEST1O76090 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.26□□□□□ -2.05
BEST1O76090 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.26□□□□□ -2.05
BEST1O76090 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.26□□□□□ -2.05
BEST1O76090 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
BEST1O76090 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
BEST1O76090 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
BEST1O76090 Y_RNA.99-201ENST00000363138 105 ntBASIC2.25□□□□□ -2.05
BEST1O76090 Y_RNA.157-201ENST00000363638 102 ntBASIC2.25□□□□□ -2.05
BEST1O76090 Y_RNA.414-201ENST00000384011 101 ntBASIC2.25□□□□□ -2.05
BEST1O76090 SNORA36A-201ENST00000384221 132 ntBASIC2.25□□□□□ -2.05
BEST1O76090 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
BEST1O76090 SNORD115-47-201ENST00000391226 86 ntBASIC2.25□□□□□ -2.05
BEST1O76090 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
BEST1O76090 USP9YP28-201ENST00000435142 589 ntBASIC2.25□□□□□ -2.05
BEST1O76090 UBE2V1P8-201ENST00000437166 265 ntBASIC2.25□□□□□ -2.05
BEST1O76090 RNU7-66P-201ENST00000459469 62 ntBASIC2.25□□□□□ -2.05
BEST1O76090 AC021146.2-201ENST00000504736 556 ntBASIC2.25□□□□□ -2.05
BEST1O76090 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.25□□□□□ -2.05
BEST1O76090 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.25□□□□□ -2.05
BEST1O76090 FGF7P1-201ENST00000582820 288 ntBASIC2.25□□□□□ -2.05
BEST1O76090 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
BEST1O76090 AC068790.6-201ENST00000602558 258 ntBASIC2.25□□□□□ -2.05
BEST1O76090 AC073869.6-201ENST00000640656 341 ntBASIC2.25□□□□□ -2.05
BEST1O76090 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
BEST1O76090 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
BEST1O76090 RNU6-234P-201ENST00000365229 104 ntBASIC2.24□□□□□ -2.05
BEST1O76090 RNU6-378P-201ENST00000384324 107 ntBASIC2.24□□□□□ -2.05
BEST1O76090 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
BEST1O76090 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
BEST1O76090 MIR208B-201ENST00000401172 77 ntBASIC2.24□□□□□ -2.05
BEST1O76090 MIR1261-201ENST00000408659 82 ntBASIC2.24□□□□□ -2.05
BEST1O76090 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.24□□□□□ -2.05
BEST1O76090 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST1O76090 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST1O76090 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.24□□□□□ -2.05
BEST1O76090 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
BEST1O76090 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST1O76090 AC005741.1-201ENST00000511094 432 ntBASIC2.24□□□□□ -2.05
BEST1O76090 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST1O76090 RNU6-256P-201ENST00000516747 97 ntBASIC2.24□□□□□ -2.05
BEST1O76090 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.24□□□□□ -2.05
BEST1O76090 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BEST1O76090 AL133215.3-201ENST00000609801 448 ntBASIC2.24□□□□□ -2.05
BEST1O76090 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
BEST1O76090 AL138726.1-201ENST00000614873 333 ntBASIC2.24□□□□□ -2.05
BEST1O76090 AC008555.8-201ENST00000623602 2168 ntBASIC2.24□□□□□ -2.05
BEST1O76090 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
BEST1O76090 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
BEST1O76090 SNORD115-3-201ENST00000363100 82 ntBASIC2.23□□□□□ -2.05
BEST1O76090 Y_RNA.123-201ENST00000363338 102 ntBASIC2.23□□□□□ -2.05
BEST1O76090 RNU6-1286P-201ENST00000383871 107 ntBASIC2.23□□□□□ -2.05
BEST1O76090 MIR521-1-201ENST00000384902 87 ntBASIC2.23□□□□□ -2.05
BEST1O76090 SNORA48.3-201ENST00000391081 134 ntBASIC2.23□□□□□ -2.05
BEST1O76090 RNA5SP465-201ENST00000391195 109 ntBASIC2.23□□□□□ -2.05
BEST1O76090 RNU2-2P-201ENST00000410396 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.23□□□□□ -2.05
BEST1O76090 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.23□□□□□ -2.05
BEST1O76090 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.23□□□□□ -2.05
BEST1O76090 MTCO3P18-201ENST00000440206 761 ntBASIC2.23□□□□□ -2.05
BEST1O76090 HMGN2P18-201ENST00000450680 270 ntBASIC2.23□□□□□ -2.05
BEST1O76090 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.23□□□□□ -2.05
BEST1O76090 RPS29P25-201ENST00000481709 171 ntBASIC2.23□□□□□ -2.05
BEST1O76090 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
BEST1O76090 RNU6-991P-201ENST00000516168 107 ntBASIC2.23□□□□□ -2.05
BEST1O76090 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
BEST1O76090 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.23□□□□□ -2.05
BEST1O76090 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.23□□□□□ -2.05
BEST1O76090 AC009994.1-201ENST00000606889 253 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.15-201ENST00000611544 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.16-201ENST00000613119 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.12-201ENST00000613778 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.20-201ENST00000613956 192 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.9-201ENST00000615427 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.11-201ENST00000616345 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.2-201ENST00000616535 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.3-201ENST00000617785 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.19-201ENST00000618602 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 RNU2-1-201ENST00000618664 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.6-201ENST00000619225 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.5-201ENST00000619465 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 U2.10-201ENST00000620268 191 ntBASIC2.23□□□□□ -2.05
BEST1O76090 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.23□□□□□ -2.05
BEST1O76090 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms