Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ANXA2P1-201ENST00000505539 926 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
VPS4BO75351 AC021231.3-201ENST00000558497 370 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS4BO75351 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4BO75351 uc_338.14-201ENST00000613162 166 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 AC137590.2-201ENST00000619709 240 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 7SK.10-201ENST00000621414 298 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS4BO75351 ZNF72P-201ENST00000425869 1908 ntBASIC3.03□□□□□ -1.92
VPS4BO75351 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS4BO75351 RNU6-137P-201ENST00000363680 108 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 RNU6-450P-201ENST00000364654 107 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 Y_RNA.504-201ENST00000384481 104 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 Y_RNA.551-201ENST00000384661 102 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 AL031121.1-201ENST00000406553 254 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 GPM6BP3-201ENST00000442797 145 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 FCF1P4-201ENST00000448326 183 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 AL441985.1-201ENST00000457727 251 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 RPL30P12-201ENST00000474666 353 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS4BO75351 AC090617.3-201ENST00000573670 475 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS4BO75351 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS4BO75351 AL078605.1-201ENST00000603529 500 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 AC096772.1-201ENST00000609146 564 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 AC013412.1-201ENST00000610687 192 ntBASIC3.02□□□□□ -1.93
VPS4BO75351 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS4BO75351 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS4BO75351 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS4BO75351 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS4BO75351 RNU6-799P-201ENST00000363567 107 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 SNORD115-8-201ENST00000363856 82 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 SNORD115-38-201ENST00000365037 82 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 MIR153-2-201ENST00000385225 87 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RNU6-1109P-201ENST00000391187 107 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RPL21P75-201ENST00000396599 483 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RPL21P28-201ENST00000401418 483 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RNU6-1140P-201ENST00000410517 106 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AL590556.1-201ENST00000423231 483 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS4BO75351 OSTCP8-201ENST00000445117 448 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RPL21P39-201ENST00000463605 483 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AC087190.1-201ENST00000484462 480 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AC107032.1-201ENST00000485945 480 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AC132942.1-201ENST00000486753 483 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS4BO75351 AC093591.1-201ENST00000491435 481 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RPS27P26-201ENST00000494583 239 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 RPL21P16-201ENST00000495531 483 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 GZMAP1-201ENST00000503054 631 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS4BO75351 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS4BO75351 AP002770.2-201ENST00000543613 532 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AL442163.3-201ENST00000554110 156 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 MIR4672-201ENST00000583126 81 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 AL359198.2-201ENST00000611836 194 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.01□□□□□ -1.93
VPS4BO75351 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS4BO75351 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS4BO75351 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS4BO75351 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS4BO75351 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
VPS4BO75351 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3□□□□□ -1.93
VPS4BO75351 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
VPS4BO75351 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
VPS4BO75351 Y_RNA.27-201ENST00000362540 103 ntBASIC3□□□□□ -1.93
VPS4BO75351 Y_RNA.47-201ENST00000362697 108 ntBASIC3□□□□□ -1.93
VPS4BO75351 RNU6-529P-201ENST00000363383 104 ntBASIC3□□□□□ -1.93
VPS4BO75351 Y_RNA.149-201ENST00000363558 117 ntBASIC3□□□□□ -1.93
VPS4BO75351 Y_RNA.358-201ENST00000365491 99 ntBASIC3□□□□□ -1.93
VPS4BO75351 SNORA36A-201ENST00000384221 132 ntBASIC3□□□□□ -1.93
VPS4BO75351 MIR147B-201ENST00000390185 80 ntBASIC3□□□□□ -1.93
VPS4BO75351 RNU1-139P-201ENST00000391307 165 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC114482.1-201ENST00000418010 247 ntBASIC3□□□□□ -1.93
VPS4BO75351 AIMP1P2-201ENST00000425294 312 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC009414.1-201ENST00000427200 443 ntBASIC3□□□□□ -1.93
VPS4BO75351 IPO7P1-201ENST00000442031 636 ntBASIC3□□□□□ -1.93
VPS4BO75351 OR2AQ1P-201ENST00000451972 200 ntBASIC3□□□□□ -1.93
VPS4BO75351 MTCO3P8-201ENST00000453691 755 ntBASIC3□□□□□ -1.93
VPS4BO75351 AP000705.1-201ENST00000454567 350 ntBASIC3□□□□□ -1.93
VPS4BO75351 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3□□□□□ -1.93
VPS4BO75351 TOMM22P6-201ENST00000465035 409 ntBASIC3□□□□□ -1.93
VPS4BO75351 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
VPS4BO75351 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC091144.1-201ENST00000519573 138 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
VPS4BO75351 AC079598.5-201ENST00000547460 117 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC027288.2-201ENST00000553028 243 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC008269.2-201ENST00000561915 1105 ntBASIC3□□□□□ -1.93
VPS4BO75351 MIR4503-201ENST00000582187 83 ntBASIC3□□□□□ -1.93
VPS4BO75351 MIR3136-201ENST00000583498 78 ntBASIC3□□□□□ -1.93
VPS4BO75351 AC005520.5-201ENST00000613926 164 ntBASIC3□□□□□ -1.93
VPS4BO75351 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3□□□□□ -1.93
VPS4BO75351 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3□□□□□ -1.93
VPS4BO75351 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3□□□□□ -1.93
VPS4BO75351 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms