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Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
RNU6-1281P-201
ENST00000516223
105 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
RNU6-1038P-201
ENST00000516516
104 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AC103853.2-201
ENST00000519805
716 nt
TSL 3
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AC026765.1-201
ENST00000547876
435 nt
TSL 3
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AL157687.1-201
ENST00000554853
619 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AC009120.5-201
ENST00000561669
475 nt
TSL 5
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
MIR3935-201
ENST00000583472
104 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AP005057.1-201
ENST00000583827
574 nt
TSL 4
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AC023043.2-201
ENST00000589678
1026 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AC243960.4-201
ENST00000600532
288 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AL034555.1-201
ENST00000604816
211 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
AL627230.6-201
ENST00000611129
280 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
MIR8081-201
ENST00000611533
95 nt
BASIC
1.87
□□□□□ -2.11
SDC3
O75056
RNU6-522P-201
ENST00000364497
107 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
RNU6-483P-201
ENST00000384088
108 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
SNORD116-4-201
ENST00000384733
96 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
MIR181A1-201
ENST00000385026
110 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
RNU6-1106P-201
ENST00000390845
107 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
Y_RNA.595-201
ENST00000410403
105 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
AP000275.1-201
ENST00000411943
390 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
AL137856.1-202
ENST00000418238
422 nt
TSL 3
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
LINC01807-201
ENST00000432481
676 nt
TSL 3
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
IFNA20P-201
ENST00000436840
528 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
RPL23AP6-201
ENST00000446637
472 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
AL021397.1-201
ENST00000451806
248 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
RPL23AP3-201
ENST00000453844
468 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
PRELID3BP1-201
ENST00000457142
540 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
RNU6-720P-201
ENST00000516363
108 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
AP005597.4-201
ENST00000526762
229 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
AC011611.2-201
ENST00000549888
358 nt
TSL 3
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
MIR5692C1-201
ENST00000585309
91 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
AC005034.5-201
ENST00000604219
466 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
RNU6-89P-201
ENST00000606519
100 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
DISC2.1-201
ENST00000612827
205 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
TMEM154-204
ENST00000613578
486 nt
APPRIS ALT2
TSL 5
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
FER-210
ENST00000628534
558 nt
TSL 5
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
SNORD98-201
ENST00000636377
67 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
MIR1321-201
ENST00000637766
79 nt
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
DEUP1-201
ENST00000298050
2664 nt
APPRIS P1
TSL 5
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
TBC1D31-206
ENST00000518805
2201 nt
TSL 2
BASIC
1.86
□□□□□ -2.11
SDC3
O75056
ZNF355P-201
ENST00000427301
3216 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AC092268.1-201
ENST00000342691
405 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
RNU4-15P-201
ENST00000362613
141 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
Y_RNA.164-201
ENST00000363709
102 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
Y_RNA.372-201
ENST00000365599
102 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
MIR29C-201
ENST00000385231
88 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
SNORA17.3-201
ENST00000391159
129 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
BTF3L4P2-201
ENST00000392798
346 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
EIF4E2P1-201
ENST00000393781
255 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
Y_RNA.597-201
ENST00000410463
100 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
RNU6-1068P-201
ENST00000410958
103 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AL030996.1-201
ENST00000411430
235 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
TTTY3-201
ENST00000417334
344 nt
TSL 1 (best)
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AL669831.2-201
ENST00000422528
456 nt
TSL 5
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
HMGN2P19-201
ENST00000425149
265 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AC108667.1-201
ENST00000428618
249 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AL591501.1-201
ENST00000439992
495 nt
TSL 5
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
LINC01549-201
ENST00000440664
714 nt
TSL 3
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
SNORD13-201
ENST00000459299
104 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
RNU6-1037P-201
ENST00000459571
107 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AC107208.1-201
ENST00000508265
519 nt
TSL 4
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
SNORA19.2-201
ENST00000516013
114 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AC025871.1-202
ENST00000518819
432 nt
TSL 3
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
HSPE1P4-201
ENST00000550617
308 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
MIR4299-201
ENST00000577899
72 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AC245748.3-201
ENST00000588710
241 nt
TSL 3
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
AC016727.1-205
ENST00000605437
569 nt
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
C16orf97-206
ENST00000622950
415 nt
TSL 2
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
TTTY3B-201
ENST00000631331
344 nt
TSL 1 (best)
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
TBL1XR1-208
ENST00000430069
7948 nt
APPRIS P1
TSL 1 (best)
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
SLCO1B3-202
ENST00000381545
2805 nt
APPRIS P1
TSL 2
BASIC
1.85
□□□□□ -2.11
SDC3
O75056
OR4G1P-203
ENST00000641984
1631 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
XIRP2-201
ENST00000295237
5246 nt
TSL 2
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AL161668.1-201
ENST00000320322
358 nt
TSL 1 (best)
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
SNORD32B-201
ENST00000364460
84 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
SNORD73A-201
ENST00000386062
65 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
MTCYBP2-201
ENST00000407745
171 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
MIR1262-201
ENST00000408276
93 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AL158823.1-201
ENST00000418441
478 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC005062.1-207
ENST00000418442
587 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
ERLEC1P1-201
ENST00000433806
578 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AL356124.2-201
ENST00000442449
391 nt
TSL 5
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC092567.1-201
ENST00000452397
251 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
LINC01774-201
ENST00000453569
595 nt
TSL 2
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
SNRPGP7-201
ENST00000469016
106 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC016632.1-201
ENST00000503994
196 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
MRPS17P9-201
ENST00000511924
393 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
PTP4A1P4-201
ENST00000512479
322 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
SNORA25.15-201
ENST00000516487
89 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
Y_RNA.704-201
ENST00000516851
102 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
RNU6-323P-201
ENST00000521915
107 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AP005660.1-201
ENST00000522972
293 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC107886.1-201
ENST00000526935
516 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC068205.1-204
ENST00000532989
481 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC027018.1-202
ENST00000534723
383 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC023906.2-201
ENST00000558343
462 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AP005530.1-201
ENST00000572608
567 nt
TSL 3
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC004492.1-201
ENST00000607036
742 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AC064807.4-201
ENST00000607201
407 nt
BASIC
1.84
□□□□□ -2.11
SDC3
O75056
AF250324.2-201
ENST00000608299
610 nt
BASIC
1.84
□□□□□ -2.11
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