Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CALM2P2-201ENST00000428512 440 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 AC098934.3-201ENST00000430450 190 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 FABP5P4-201ENST00000437203 171 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 HMGB1P29-201ENST00000505659 499 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.16□□□□□ -2.38
PFDN1O60925 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.16□□□□□ -2.38
PFDN1O60925 MIR544B-201ENST00000582372 78 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 AL390123.1-201ENST00000603216 237 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 AC006927.4-201ENST00000639187 543 ntBASIC0.16□□□□□ -2.38
PFDN1O60925 BX322639.1-202ENST00000423987 2213 ntBASIC0.15□□□□□ -2.38
PFDN1O60925 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
PFDN1O60925 U3.9-201ENST00000363823 204 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 SNORA72.2-201ENST00000365028 127 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 RNU6-950P-201ENST00000384651 107 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 USP9YP21-201ENST00000420603 432 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AC244670.1-201ENST00000436879 112 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.15□□□□□ -2.39
PFDN1O60925 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.15□□□□□ -2.39
PFDN1O60925 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.15□□□□□ -2.39
PFDN1O60925 SNRPFP3-201ENST00000457792 225 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 RNU7-90P-201ENST00000459216 62 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AC007547.1-201ENST00000462177 490 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.15□□□□□ -2.39
PFDN1O60925 RNU6-1028P-201ENST00000517164 93 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AL596327.1-201ENST00000603629 213 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 Z98751.3-201ENST00000604447 521 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AC064872.1-201ENST00000604823 1072 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AC243829.6-201ENST00000612652 106 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 PCGEM1.1-201ENST00000613431 131 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AL359547.2-201ENST00000615810 418 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 7SK.10-201ENST00000621414 298 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 AC068787.1-201ENST00000623908 691 ntBASIC0.15□□□□□ -2.39
PFDN1O60925 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.15□□□□□ -2.39
PFDN1O60925 AL442644.1-201ENST00000454390 3105 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 RNU1-76P-201ENST00000362903 159 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 RNU6-105P-201ENST00000363909 104 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.14□□□□□ -2.39
PFDN1O60925 RNU6-692P-201ENST00000384496 107 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 SNORD89-201ENST00000390981 114 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 RNA5SP467-201ENST00000391274 118 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 MTND4P3-201ENST00000417829 541 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 AC010975.2-201ENST00000427781 588 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 HMGN2P34-201ENST00000437647 269 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 AL606662.1-201ENST00000445763 553 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 AL133217.1-201ENST00000450980 425 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.14□□□□□ -2.39
PFDN1O60925 AC022493.2-201ENST00000506122 481 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 AC067942.3-201ENST00000512025 362 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 RNU6-123P-201ENST00000516163 102 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.14□□□□□ -2.39
PFDN1O60925 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.14□□□□□ -2.39
PFDN1O60925 AC097065.2-201ENST00000608159 533 ntBASIC0.14□□□□□ -2.39
PFDN1O60925 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.14□□□□□ -2.39
PFDN1O60925 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
PFDN1O60925 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
PFDN1O60925 snoU2-30.2-201ENST00000362805 70 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 SNORA36.2-201ENST00000384004 127 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RNU6-1235P-201ENST00000384559 107 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RNU6-417P-201ENST00000384712 107 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.13□□□□□ -2.39
PFDN1O60925 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.13□□□□□ -2.39
PFDN1O60925 RNU6-498P-201ENST00000459468 107 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RN7SL429P-201ENST00000479090 223 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RN7SL489P-201ENST00000486185 223 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RN7SL327P-201ENST00000488659 223 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RN7SKP12-201ENST00000516275 143 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.13□□□□□ -2.39
PFDN1O60925 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.13□□□□□ -2.39
PFDN1O60925 MIR4778-201ENST00000577635 80 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 BNIP3P26-201ENST00000600827 554 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 AC078795.3-201ENST00000602913 472 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 AC091965.4-201ENST00000607691 587 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RN7SL853P-201ENST00000617250 223 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 AC243829.3-201ENST00000622177 108 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.13□□□□□ -2.39
PFDN1O60925 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
PFDN1O60925 CASC19-280ENST00000642102 1351 ntBASIC0.13□□□□□ -2.39
PFDN1O60925 RNU6-462P-201ENST00000362659 105 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 RNU2-62P-201ENST00000410868 191 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 RNA5SP222-201ENST00000411039 105 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AP000275.1-201ENST00000411943 390 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AC006366.1-201ENST00000422002 759 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 HSFY7P-201ENST00000432672 318 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 USP9YP28-201ENST00000435142 589 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 HSFY8P-201ENST00000437934 318 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.12□□□□□ -2.39
PFDN1O60925 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.12□□□□□ -2.39
PFDN1O60925 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.12□□□□□ -2.39
PFDN1O60925 TRMT112P2-201ENST00000512910 132 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
PFDN1O60925 AC090517.1-201ENST00000569307 266 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AC011195.1-201ENST00000578177 177 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 MIR3923-201ENST00000579521 83 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AC092354.1-201ENST00000606057 376 ntBASIC0.12□□□□□ -2.39
PFDN1O60925 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.12□□□□□ -2.39
PFDN1O60925 AC097478.2-201ENST00000610572 514 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms