Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-890P-201ENST00000384121 107 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 RNU6-574P-201ENST00000384265 107 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 RNU6-842P-201ENST00000384269 107 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 Y_RNA.463-201ENST00000384271 102 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 RNU6-985P-201ENST00000410182 104 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 RPL7P37-201ENST00000425095 738 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.39□□□□□ -2.03
CACNA1FO60840 AC022493.1-201ENST00000492984 337 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.39□□□□□ -2.03
CACNA1FO60840 AC114801.2-201ENST00000503825 781 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC021146.2-201ENST00000504736 556 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC116655.1-201ENST00000508324 901 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 Y_RNA.661-201ENST00000516003 99 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 Y_RNA.708-201ENST00000516950 96 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.39□□□□□ -2.03
CACNA1FO60840 MIR1273C-201ENST00000578669 77 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 BNIP3P16-201ENST00000589779 534 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.39□□□□□ -2.03
CACNA1FO60840 AC136443.5-201ENST00000603741 370 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC106900.2-201ENST00000604994 317 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 RNU6-85P-201ENST00000605989 107 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC007485.1-201ENST00000616755 206 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AC008121.3-201ENST00000618726 433 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 AL078596.1-201ENST00000624856 447 ntBASIC2.39□□□□□ -2.03
CACNA1FO60840 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CACNA1FO60840 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.38□□□□□ -2.03
CACNA1FO60840 Y_RNA.5-201ENST00000362334 102 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 SNORA63C-201ENST00000364578 129 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 RNU6-99P-201ENST00000364721 107 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 RNU6-741P-201ENST00000383889 107 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 SNORA75B-201ENST00000384053 137 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 MIR578-201ENST00000384828 96 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 RNU6-174P-201ENST00000410406 106 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 RPL19P1-201ENST00000411635 428 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AL353621.1-201ENST00000418219 243 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.38□□□□□ -2.03
CACNA1FO60840 MIR4680-201ENST00000580906 66 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AL132822.1-201ENST00000617063 513 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AL049641.1-201ENST00000441055 1948 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CACNA1FO60840 AC008669.1-201ENST00000565823 2178 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CACNA1FO60840 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CACNA1FO60840 RNU6-607P-201ENST00000411283 108 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 RNA5SP492-201ENST00000411330 114 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.38□□□□□ -2.03
CACNA1FO60840 U8.21-201ENST00000459536 136 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AC087588.1-201ENST00000462203 316 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AC096745.1-201ENST00000509945 370 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AC092436.3-201ENST00000511788 257 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 AC004817.2-201ENST00000561794 651 ntBASIC2.38□□□□□ -2.03
CACNA1FO60840 ZNF72P-201ENST00000425869 1908 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CACNA1FO60840 Y_RNA.193-201ENST00000363979 102 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 SNORD56.5-201ENST00000364281 72 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 Y_RNA.252-201ENST00000364556 101 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 Y_RNA.459-201ENST00000384251 102 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 RNU6-1179P-201ENST00000384667 107 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 RNU6-331P-201ENST00000384724 107 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CACNA1FO60840 MTCYBP10-201ENST00000424905 650 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AC007560.1-201ENST00000426912 237 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1FO60840 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1FO60840 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1FO60840 DAP3P1-201ENST00000441522 278 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AC009237.8-201ENST00000445492 379 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1FO60840 AL049874.1-201ENST00000489560 388 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 RNU6-927P-201ENST00000516199 100 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.37□□□□□ -2.03
CACNA1FO60840 ATP5F1P5-201ENST00000526403 760 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AC110588.1-201ENST00000559699 137 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.37□□□□□ -2.03
CACNA1FO60840 AC008739.2-201ENST00000597006 317 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 AC009229.3-201ENST00000608056 282 ntBASIC2.37□□□□□ -2.03
CACNA1FO60840 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CACNA1FO60840 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.37□□□□□ -2.03
CACNA1FO60840 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
CACNA1FO60840 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CACNA1FO60840 MIR412-201ENST00000362142 91 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-1167P-201ENST00000363227 94 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-1025P-201ENST00000410629 104 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-325P-201ENST00000411132 105 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.36□□□□□ -2.03
CACNA1FO60840 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1FO60840 PCMTD1P1-201ENST00000455560 355 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 MIR2053-201ENST00000459295 91 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AC011005.2-201ENST00000487324 359 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AC113155.1-201ENST00000511141 769 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-307P-201ENST00000516743 106 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 FAM60BP-201ENST00000578364 658 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-1115P-201ENST00000362490 106 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-1032P-201ENST00000384100 107 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 MIR493-201ENST00000385254 89 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AL030996.1-201ENST00000411430 235 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms