Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB2O43679 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.62□□□□□ -1.99
LDB2O43679 MIR3162-201ENST00000581818 82 ntBASIC2.62□□□□□ -1.99
LDB2O43679 MIR4298-201ENST00000584380 73 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AL355877.2-201ENST00000603670 358 ntBASIC2.62□□□□□ -1.99
LDB2O43679 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.62□□□□□ -1.99
LDB2O43679 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LDB2O43679 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LDB2O43679 AC233981.2-201ENST00000611524 1614 ntBASIC2.61□□□□□ -1.99
LDB2O43679 SNORA63C-201ENST00000364578 129 ntBASIC2.61□□□□□ -1.99
LDB2O43679 Y_RNA.314-201ENST00000365114 102 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RNU6-1286P-201ENST00000383871 107 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RNU6-142P-201ENST00000384019 107 ntBASIC2.61□□□□□ -1.99
LDB2O43679 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
LDB2O43679 MIR625-201ENST00000385047 85 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
LDB2O43679 MRPL42P3-201ENST00000401492 326 ntBASIC2.61□□□□□ -1.99
LDB2O43679 MTCYBP2-201ENST00000407745 171 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RNU6-1156P-201ENST00000410365 100 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RN7SKP61-201ENST00000410642 295 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC007098.1-201ENST00000420122 367 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RPL39P29-201ENST00000447779 157 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB2O43679 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
LDB2O43679 RPS27P26-201ENST00000494583 239 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC016632.1-201ENST00000503994 196 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB2O43679 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
LDB2O43679 RNU6-1045P-201ENST00000516321 107 ntBASIC2.61□□□□□ -1.99
LDB2O43679 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.61□□□□□ -1.99
LDB2O43679 GNAI2P1-201ENST00000541815 315 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB2O43679 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB2O43679 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB2O43679 RPS15AP11-201ENST00000594193 385 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC092447.9-201ENST00000603395 144 ntBASIC2.61□□□□□ -1.99
LDB2O43679 7SK.7-201ENST00000603504 247 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB2O43679 AC096772.1-201ENST00000609146 564 ntBASIC2.61□□□□□ -1.99
LDB2O43679 AC110079.1-202ENST00000635213 138 ntBASIC2.61□□□□□ -1.99
LDB2O43679 IGHVIII-44-202ENST00000636235 289 ntBASIC2.61□□□□□ -1.99
LDB2O43679 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LDB2O43679 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LDB2O43679 Y_RNA.80-201ENST00000362996 102 ntBASIC2.6□□□□□ -1.99
LDB2O43679 Y_RNA.158-201ENST00000363651 101 ntBASIC2.6□□□□□ -1.99
LDB2O43679 RNU4-9P-201ENST00000364951 139 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AL358453.1-201ENST00000422522 250 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
LDB2O43679 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB2O43679 OSTCP8-201ENST00000445117 448 ntBASIC2.6□□□□□ -1.99
LDB2O43679 UBBP3-201ENST00000445497 241 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.6□□□□□ -1.99
LDB2O43679 SNRPGP7-201ENST00000469016 106 ntBASIC2.6□□□□□ -1.99
LDB2O43679 RPL30P12-201ENST00000474666 353 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC104564.1-201ENST00000493028 407 ntBASIC2.6□□□□□ -1.99
LDB2O43679 RNU6-475P-201ENST00000516073 104 ntBASIC2.6□□□□□ -1.99
LDB2O43679 MRPS36P4-201ENST00000534436 298 ntBASIC2.6□□□□□ -1.99
LDB2O43679 HSPE1P4-201ENST00000550617 308 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC104581.2-201ENST00000572227 430 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC010620.2-201ENST00000600135 313 ntBASIC2.6□□□□□ -1.99
LDB2O43679 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.6□□□□□ -1.99
LDB2O43679 AC007792.1-201ENST00000623023 402 ntBASIC2.6□□□□□ -1.99
LDB2O43679 SCARNA4-201ENST00000629045 128 ntBASIC2.6□□□□□ -1.99
LDB2O43679 SNORA43.4-201ENST00000629559 138 ntBASIC2.6□□□□□ -1.99
LDB2O43679 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.6□□□□□ -1.99
LDB2O43679 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
LDB2O43679 AP000560.1-201ENST00000624150 1937 ntBASIC2.6□□□□□ -1.99
LDB2O43679 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LDB2O43679 MTND4P1-201ENST00000457501 1466 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AC092268.1-201ENST00000342691 405 ntBASIC2.59□□□□□ -1.99
LDB2O43679 Y_RNA.39-201ENST00000362620 98 ntBASIC2.59□□□□□ -1.99
LDB2O43679 RNU6-859P-201ENST00000362728 107 ntBASIC2.59□□□□□ -1.99
LDB2O43679 RNU6-1010P-201ENST00000362757 107 ntBASIC2.59□□□□□ -1.99
LDB2O43679 RNU6-1285P-201ENST00000363480 105 ntBASIC2.59□□□□□ -1.99
LDB2O43679 Y_RNA.504-201ENST00000384481 104 ntBASIC2.59□□□□□ -1.99
LDB2O43679 SNORA12.2-201ENST00000391040 156 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AL133475.1-201ENST00000404414 305 ntBASIC2.59□□□□□ -1.99
LDB2O43679 RNU2-23P-201ENST00000410545 195 ntBASIC2.59□□□□□ -1.99
LDB2O43679 RNA5SP494-201ENST00000410653 129 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB2O43679 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AC092423.1-201ENST00000430165 186 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AL160004.2-201ENST00000432935 350 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AC096725.1-201ENST00000514266 313 ntBASIC2.59□□□□□ -1.99
LDB2O43679 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.59□□□□□ -1.99
LDB2O43679 RNU4-77P-201ENST00000516692 156 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.59□□□□□ -1.99
LDB2O43679 AC105137.2-201ENST00000569073 466 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AC116312.1-201ENST00000606841 314 ntBASIC2.59□□□□□ -1.99
LDB2O43679 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.59□□□□□ -1.99
LDB2O43679 MIR1244-1-201ENST00000612829 85 ntBASIC2.59□□□□□ -1.99
LDB2O43679 uc_338.14-201ENST00000613162 166 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AL138825.1-201ENST00000618587 192 ntBASIC2.59□□□□□ -1.99
LDB2O43679 AL606534.2-204ENST00000635008 178 ntBASIC2.59□□□□□ -1.99
LDB2O43679 MIR1244-3-201ENST00000635744 85 ntBASIC2.59□□□□□ -1.99
LDB2O43679 MIR1244-2-201ENST00000636449 85 ntBASIC2.59□□□□□ -1.99
LDB2O43679 MIR1244-4-202ENST00000636813 85 ntBASIC2.59□□□□□ -1.99
LDB2O43679 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.59□□□□□ -2
LDB2O43679 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms