Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
RNF13O43567 ARL5AP1-201ENST00000418991 388 ntBASIC1.29□□□□□ -2.2
RNF13O43567 CYCSP46-201ENST00000423569 204 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.29□□□□□ -2.2
RNF13O43567 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
RNF13O43567 SNORD42A-201ENST00000459584 64 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC010531.2-201ENST00000465012 153 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC069113.1-201ENST00000517763 267 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF13O43567 AC103996.1-201ENST00000555468 102 ntBASIC1.29□□□□□ -2.2
RNF13O43567 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF13O43567 AC012414.6-201ENST00000568241 401 ntBASIC1.29□□□□□ -2.2
RNF13O43567 MIR3908-201ENST00000579798 126 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.29□□□□□ -2.2
RNF13O43567 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.29□□□□□ -2.2
RNF13O43567 AP001836.1-201ENST00000604675 523 ntBASIC1.29□□□□□ -2.2
RNF13O43567 Z84480.1-201ENST00000605131 311 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC009994.1-201ENST00000606889 253 ntBASIC1.29□□□□□ -2.2
RNF13O43567 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC136475.10-201ENST00000620253 385 ntBASIC1.29□□□□□ -2.2
RNF13O43567 MIR8063-201ENST00000621930 81 ntBASIC1.29□□□□□ -2.2
RNF13O43567 AC100821.1-201ENST00000523153 2479 ntBASIC1.29□□□□□ -2.2
RNF13O43567 SNORA63D-201ENST00000364359 132 ntBASIC1.28□□□□□ -2.2
RNF13O43567 SNORA72.3-201ENST00000365074 132 ntBASIC1.28□□□□□ -2.2
RNF13O43567 Y_RNA.399-201ENST00000383955 105 ntBASIC1.28□□□□□ -2.2
RNF13O43567 RNU6-606P-201ENST00000384721 111 ntBASIC1.28□□□□□ -2.2
RNF13O43567 RNU2-7P-201ENST00000410794 178 ntBASIC1.28□□□□□ -2.2
RNF13O43567 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.28□□□□□ -2.2
RNF13O43567 RPS27P16-201ENST00000425758 201 ntBASIC1.28□□□□□ -2.2
RNF13O43567 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.28□□□□□ -2.2
RNF13O43567 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
RNF13O43567 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.28□□□□□ -2.2
RNF13O43567 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
RNF13O43567 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
RNF13O43567 AC064872.1-201ENST00000604823 1072 ntBASIC1.28□□□□□ -2.2
RNF13O43567 AC064807.4-201ENST00000607201 407 ntBASIC1.28□□□□□ -2.2
RNF13O43567 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
RNF13O43567 RNU6-862P-201ENST00000362804 105 ntBASIC1.27□□□□□ -2.21
RNF13O43567 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
RNF13O43567 RNU6-1026P-201ENST00000384465 108 ntBASIC1.27□□□□□ -2.21
RNF13O43567 Y_RNA.504-201ENST00000384481 104 ntBASIC1.27□□□□□ -2.21
RNF13O43567 RNU6-174P-201ENST00000410406 106 ntBASIC1.27□□□□□ -2.21
RNF13O43567 AP000275.1-201ENST00000411943 390 ntBASIC1.27□□□□□ -2.21
RNF13O43567 AL161935.2-201ENST00000414627 60 ntBASIC1.27□□□□□ -2.21
RNF13O43567 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.27□□□□□ -2.21
RNF13O43567 AL591806.2-201ENST00000433122 173 ntBASIC1.27□□□□□ -2.21
RNF13O43567 OR2AQ1P-201ENST00000451972 200 ntBASIC1.27□□□□□ -2.21
RNF13O43567 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.27□□□□□ -2.21
RNF13O43567 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.27□□□□□ -2.21
RNF13O43567 SCARNA18-201ENST00000459004 134 ntBASIC1.27□□□□□ -2.21
RNF13O43567 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.27□□□□□ -2.21
RNF13O43567 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
RNF13O43567 AGGF1P4-201ENST00000568249 801 ntBASIC1.27□□□□□ -2.21
RNF13O43567 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.27□□□□□ -2.21
RNF13O43567 AP001596.2-201ENST00000608410 312 ntBASIC1.27□□□□□ -2.21
RNF13O43567 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.27□□□□□ -2.21
RNF13O43567 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
RNF13O43567 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
RNF13O43567 RNU4-13P-201ENST00000364019 141 ntBASIC1.26□□□□□ -2.21
RNF13O43567 MIR548B-201ENST00000385247 97 ntBASIC1.26□□□□□ -2.21
RNF13O43567 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.26□□□□□ -2.21
RNF13O43567 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.26□□□□□ -2.21
RNF13O43567 AC133104.1-201ENST00000429100 218 ntBASIC1.26□□□□□ -2.21
RNF13O43567 AC069257.2-201ENST00000441819 155 ntBASIC1.26□□□□□ -2.21
RNF13O43567 snoU13.30-201ENST00000458951 104 ntBASIC1.26□□□□□ -2.21
RNF13O43567 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
RNF13O43567 RPS23P5-201ENST00000495419 428 ntBASIC1.26□□□□□ -2.21
RNF13O43567 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.26□□□□□ -2.21
RNF13O43567 AC091874.1-201ENST00000511402 339 ntBASIC1.26□□□□□ -2.21
RNF13O43567 RNU6-759P-201ENST00000516740 103 ntBASIC1.26□□□□□ -2.21
RNF13O43567 SNORA18.6-201ENST00000516792 115 ntBASIC1.26□□□□□ -2.21
RNF13O43567 RNU6-856P-201ENST00000516959 98 ntBASIC1.26□□□□□ -2.21
RNF13O43567 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.26□□□□□ -2.21
RNF13O43567 RAB11AP2-201ENST00000545905 639 ntBASIC1.26□□□□□ -2.21
RNF13O43567 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.26□□□□□ -2.21
RNF13O43567 AC090517.1-201ENST00000569307 266 ntBASIC1.26□□□□□ -2.21
RNF13O43567 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.26□□□□□ -2.21
RNF13O43567 AC009161.2-201ENST00000624626 138 ntBASIC1.26□□□□□ -2.21
RNF13O43567 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
RNF13O43567 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RNF13O43567 RNU4-21P-201ENST00000362802 126 ntBASIC1.25□□□□□ -2.21
RNF13O43567 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
RNF13O43567 RNU1-96P-201ENST00000364163 162 ntBASIC1.25□□□□□ -2.21
RNF13O43567 RNU6-297P-201ENST00000384636 107 ntBASIC1.25□□□□□ -2.21
RNF13O43567 RNU2-29P-201ENST00000410423 189 ntBASIC1.25□□□□□ -2.21
RNF13O43567 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF13O43567 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF13O43567 AC013410.2-201ENST00000422627 201 ntBASIC1.25□□□□□ -2.21
RNF13O43567 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.25□□□□□ -2.21
RNF13O43567 MTCO3P29-201ENST00000432119 779 ntBASIC1.25□□□□□ -2.21
RNF13O43567 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF13O43567 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF13O43567 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF13O43567 HMGN2P9-201ENST00000476875 229 ntBASIC1.25□□□□□ -2.21
RNF13O43567 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.25□□□□□ -2.21
RNF13O43567 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
RNF13O43567 AP002963.1-201ENST00000530590 184 ntBASIC1.25□□□□□ -2.21
RNF13O43567 AC084364.2-201ENST00000546924 395 ntBASIC1.25□□□□□ -2.21
RNF13O43567 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
RNF13O43567 AC015688.6-201ENST00000577737 104 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms