Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
MSI1O43347 Y_RNA.40-201ENST00000362645 93 ntBASIC2.72□□□□□ -1.97
MSI1O43347 RNU6-529P-201ENST00000363383 104 ntBASIC2.72□□□□□ -1.97
MSI1O43347 SNORA33.2-201ENST00000365413 134 ntBASIC2.72□□□□□ -1.97
MSI1O43347 RNU6-1027P-201ENST00000383998 107 ntBASIC2.72□□□□□ -1.97
MSI1O43347 RNU6-968P-201ENST00000384076 107 ntBASIC2.72□□□□□ -1.97
MSI1O43347 SNORA36A-201ENST00000384221 132 ntBASIC2.72□□□□□ -1.97
MSI1O43347 RNU2-23P-201ENST00000410545 195 ntBASIC2.72□□□□□ -1.97
MSI1O43347 RN7SKP61-201ENST00000410642 295 ntBASIC2.72□□□□□ -1.97
MSI1O43347 RNA5SP494-201ENST00000410653 129 ntBASIC2.72□□□□□ -1.97
MSI1O43347 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MSI1O43347 AL358453.1-201ENST00000422522 250 ntBASIC2.72□□□□□ -1.97
MSI1O43347 MTCO3P29-201ENST00000432119 779 ntBASIC2.72□□□□□ -1.97
MSI1O43347 Z82188.1-201ENST00000436709 154 ntBASIC2.72□□□□□ -1.97
MSI1O43347 OSTCP8-201ENST00000445117 448 ntBASIC2.72□□□□□ -1.97
MSI1O43347 AL513124.1-201ENST00000450410 614 ntBASIC2.72□□□□□ -1.97
MSI1O43347 AF186996.7-201ENST00000492781 209 ntBASIC2.72□□□□□ -1.97
MSI1O43347 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.72□□□□□ -1.97
MSI1O43347 AC096725.1-201ENST00000514266 313 ntBASIC2.72□□□□□ -1.97
MSI1O43347 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.72□□□□□ -1.97
MSI1O43347 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.72□□□□□ -1.97
MSI1O43347 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.72□□□□□ -1.97
MSI1O43347 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.72□□□□□ -1.97
MSI1O43347 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
MSI1O43347 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
MSI1O43347 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.97
MSI1O43347 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.97
MSI1O43347 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
MSI1O43347 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
MSI1O43347 AC002543.1-201ENST00000299783 1954 ntBASIC2.71□□□□□ -1.98
MSI1O43347 RNU6-1010P-201ENST00000362757 107 ntBASIC2.71□□□□□ -1.98
MSI1O43347 Y_RNA.202-201ENST00000364083 110 ntBASIC2.71□□□□□ -1.98
MSI1O43347 RNU6-1286P-201ENST00000383871 107 ntBASIC2.71□□□□□ -1.98
MSI1O43347 Y_RNA.504-201ENST00000384481 104 ntBASIC2.71□□□□□ -1.98
MSI1O43347 Y_RNA.577-201ENST00000384794 101 ntBASIC2.71□□□□□ -1.98
MSI1O43347 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
MSI1O43347 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
MSI1O43347 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.71□□□□□ -1.98
MSI1O43347 EIF1AXP1-201ENST00000419267 435 ntBASIC2.71□□□□□ -1.98
MSI1O43347 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.71□□□□□ -1.98
MSI1O43347 RPL30P10-201ENST00000488148 337 ntBASIC2.71□□□□□ -1.98
MSI1O43347 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.71□□□□□ -1.98
MSI1O43347 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.71□□□□□ -1.98
MSI1O43347 SNORD116.3-201ENST00000517176 78 ntBASIC2.71□□□□□ -1.98
MSI1O43347 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.71□□□□□ -1.98
MSI1O43347 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.71□□□□□ -1.98
MSI1O43347 MIR5571-201ENST00000577998 113 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
MSI1O43347 AC010928.2-201ENST00000588017 287 ntBASIC2.71□□□□□ -1.98
MSI1O43347 AC016925.2-201ENST00000605108 242 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR1244-1-201ENST00000612829 85 ntBASIC2.71□□□□□ -1.98
MSI1O43347 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.71□□□□□ -1.98
MSI1O43347 MIR1244-3-201ENST00000635744 85 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR1244-2-201ENST00000636449 85 ntBASIC2.71□□□□□ -1.98
MSI1O43347 MIR1244-4-202ENST00000636813 85 ntBASIC2.71□□□□□ -1.98
MSI1O43347 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.71□□□□□ -1.98
MSI1O43347 AL109809.4-201ENST00000603520 2185 ntBASIC2.71□□□□□ -1.98
MSI1O43347 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.71□□□□□ -1.98
MSI1O43347 AC233981.2-201ENST00000611524 1614 ntBASIC2.71□□□□□ -1.98
MSI1O43347 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
MSI1O43347 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.7□□□□□ -1.98
MSI1O43347 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MSI1O43347 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
MSI1O43347 RNU6-874P-201ENST00000362390 105 ntBASIC2.7□□□□□ -1.98
MSI1O43347 RNU5B-2P-201ENST00000363036 113 ntBASIC2.7□□□□□ -1.98
MSI1O43347 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
MSI1O43347 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
MSI1O43347 Y_RNA.428-201ENST00000384078 102 ntBASIC2.7□□□□□ -1.98
MSI1O43347 SNORA29-201ENST00000384183 140 ntBASIC2.7□□□□□ -1.98
MSI1O43347 SNORA26.3-201ENST00000391119 136 ntBASIC2.7□□□□□ -1.98
MSI1O43347 RNU6-1156P-201ENST00000410365 100 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AL358075.3-201ENST00000426289 226 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AL160004.2-201ENST00000432935 350 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.7□□□□□ -1.98
MSI1O43347 CHEK2P4-201ENST00000450340 246 ntBASIC2.7□□□□□ -1.98
MSI1O43347 RPL31P41-201ENST00000477967 372 ntBASIC2.7□□□□□ -1.98
MSI1O43347 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.7□□□□□ -1.98
MSI1O43347 RPL23AP75-201ENST00000491601 451 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AC104564.1-201ENST00000493028 407 ntBASIC2.7□□□□□ -1.98
MSI1O43347 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.7□□□□□ -1.98
MSI1O43347 AL590705.4-201ENST00000532209 134 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.7□□□□□ -1.98
MSI1O43347 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.7□□□□□ -1.98
MSI1O43347 AC004584.2-201ENST00000570407 410 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AC008739.2-201ENST00000597006 317 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.7□□□□□ -1.98
MSI1O43347 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AC006157.1-201ENST00000611750 366 ntBASIC2.7□□□□□ -1.98
MSI1O43347 uc_338.14-201ENST00000613162 166 ntBASIC2.7□□□□□ -1.98
MSI1O43347 SCARNA4-201ENST00000629045 128 ntBASIC2.7□□□□□ -1.98
MSI1O43347 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.7□□□□□ -1.98
MSI1O43347 U3.13-201ENST00000364804 214 ntBASIC2.69□□□□□ -1.98
MSI1O43347 RNU1-115P-201ENST00000365329 160 ntBASIC2.69□□□□□ -1.98
MSI1O43347 RNU6-1032P-201ENST00000384100 107 ntBASIC2.69□□□□□ -1.98
MSI1O43347 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
MSI1O43347 SNORA12.2-201ENST00000391040 156 ntBASIC2.69□□□□□ -1.98
MSI1O43347 RPL21P75-201ENST00000396599 483 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms