Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAFD1O14545 Y_RNA.135-201ENST00000363439 95 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 RPS29P13-201ENST00000402041 169 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 RNU6-1304P-201ENST00000411374 106 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC003685.2-201ENST00000422795 395 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 OOSP1P1-201ENST00000423265 274 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 UBE2V1P4-201ENST00000425374 344 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 MTATP6P23-201ENST00000440153 476 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 IPO7P1-201ENST00000442031 636 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC091951.2-201ENST00000500762 203 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAFD1O14545 RNA5SP112-201ENST00000515937 99 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC118273.2-201ENST00000532092 465 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC100830.2-201ENST00000581636 240 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC073410.2-201ENST00000603240 332 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC069294.1-201ENST00000608397 350 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AL355073.2-201ENST00000612106 557 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 MIR6128-201ENST00000615528 109 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 AC022306.2-201ENST00000617563 647 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
TRAFD1O14545 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAFD1O14545 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAFD1O14545 AC092881.1-201ENST00000638218 2733 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 Y_RNA.70-201ENST00000362886 110 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 RNU6-43P-201ENST00000384302 107 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 MIR186-201ENST00000384988 86 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 MIR517A-201ENST00000385001 87 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 RNU2-2P-201ENST00000410396 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 CYCSP48-201ENST00000417124 323 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 BX276092.3-201ENST00000424182 230 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC008267.5-201ENST00000424928 265 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 RPL22P13-201ENST00000493291 347 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 MTCO1P29-201ENST00000496868 288 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 IGKV3-31-201ENST00000523109 329 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAFD1O14545 AC134698.4-201ENST00000523451 826 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC079598.5-201ENST00000547460 117 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC105245.1-201ENST00000581934 244 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAFD1O14545 AC243960.4-201ENST00000600532 288 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC096772.1-201ENST00000609146 564 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.15-201ENST00000611544 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.16-201ENST00000613119 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.12-201ENST00000613778 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.20-201ENST00000613956 192 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.9-201ENST00000615427 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.11-201ENST00000616345 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.2-201ENST00000616535 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.3-201ENST00000617785 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.19-201ENST00000618602 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 RNU2-1-201ENST00000618664 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.6-201ENST00000619225 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.5-201ENST00000619465 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 U2.10-201ENST00000620268 191 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 AC098657.3-201ENST00000620434 263 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
TRAFD1O14545 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAFD1O14545 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
TRAFD1O14545 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAFD1O14545 RNU6-486P-201ENST00000363116 107 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RNU6-1059P-201ENST00000363752 98 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RNU6-933P-201ENST00000384424 107 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RNU1-57P-201ENST00000384491 166 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AL356432.1-201ENST00000405809 419 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RNA5SP390-201ENST00000410191 113 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RPS3AP52-201ENST00000435639 297 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 HMGB1P18-201ENST00000438801 619 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC124916.1-201ENST00000444020 547 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAFD1O14545 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAFD1O14545 PCMTD1P1-201ENST00000455560 355 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.09□□□□□ -2.07
TRAFD1O14545 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAFD1O14545 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAFD1O14545 AC046134.1-201ENST00000514454 666 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAFD1O14545 HSPE1P4-201ENST00000550617 308 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAFD1O14545 AP001836.1-201ENST00000604675 523 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC009994.1-201ENST00000606889 253 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 RNU6-91P-201ENST00000607774 107 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC019193.3-201ENST00000609144 554 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC092794.2-201ENST00000620933 563 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 AC090517.3-201ENST00000625170 141 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 TPTEP1-208ENST00000636884 213 ntBASIC2.09□□□□□ -2.07
TRAFD1O14545 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
TRAFD1O14545 HAUS6P2-201ENST00000433254 2404 ntBASIC2.09□□□□□ -2.08
TRAFD1O14545 MTND4P12-201ENST00000498999 1377 ntBASIC2.09□□□□□ -2.08
TRAFD1O14545 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
TRAFD1O14545 AC009541.1-201ENST00000438279 2662 ntBASIC2.08□□□□□ -2.08
TRAFD1O14545 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
TRAFD1O14545 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAFD1O14545 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms