Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RPS29P27-201ENST00000463711 170 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 UBL5P3-201ENST00000475112 231 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AK3P2-201ENST00000507976 429 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 PTP4A1P4-201ENST00000512479 322 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.682-201ENST00000516457 100 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-1213P-201ENST00000517075 94 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC134698.4-201ENST00000523451 826 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 CBX3P7-201ENST00000532876 502 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 NACAP3-201ENST00000552100 481 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC007151.1-201ENST00000572774 483 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC090897.2-201ENST00000581715 130 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC005730.3-201ENST00000583067 366 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 MIR6715A-201ENST00000615929 79 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 SCARNA4-202ENST00000625402 129 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 MIR3529-201ENST00000637713 78 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 CBX3P1-201ENST00000325243 554 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.157-201ENST00000363638 102 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 SNORD81.2-201ENST00000365153 76 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.480-201ENST00000384364 102 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-843P-201ENST00000384454 104 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.573-201ENST00000384763 105 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 MIR544A-201ENST00000384855 91 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 MIR549A-201ENST00000385268 96 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 MIR548F5-201ENST00000408421 86 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 SNAP23P1-201ENST00000433229 246 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 IFNA20P-201ENST00000436840 528 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 FABP5P14-201ENST00000437273 393 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 MTATP6P23-201ENST00000440153 476 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AL359672.1-201ENST00000442302 409 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC124916.1-201ENST00000444020 547 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-329P-201ENST00000459618 107 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC140059.1-201ENST00000489238 361 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC091951.2-201ENST00000500762 203 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC091885.1-201ENST00000506658 268 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC008526.1-201ENST00000509149 338 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 SNORA31.16-201ENST00000516773 139 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 RNU2-44P-201ENST00000516795 194 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 SNORD19.2-201ENST00000516978 73 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AL158827.2-201ENST00000602494 330 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AC009994.1-201ENST00000606889 253 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 SDR42E1P4-201ENST00000620894 481 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 SNORA43.4-201ENST00000629559 138 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 AL691447.3-201ENST00000635020 330 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 Z75746.1-201ENST00000440243 2080 ntBASIC1.75□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-527P-201ENST00000363425 104 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 SNORA72.1-201ENST00000363485 129 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL591034.2-201ENST00000402839 359 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL356432.1-201ENST00000405809 419 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 RAP1BP3-201ENST00000407180 549 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL645568.3-201ENST00000433683 316 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 NDUFA5P4-201ENST00000436704 385 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL353752.1-201ENST00000454946 260 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC080013.2-201ENST00000460866 323 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC055731.1-201ENST00000474387 401 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 RPL36AP48-201ENST00000485521 314 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-377P-201ENST00000515965 102 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-120P-201ENST00000516077 103 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 RNU7-30P-201ENST00000516835 62 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 SCARNA3-201ENST00000517097 143 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 CYCSP27-201ENST00000527643 293 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC093249.1-201ENST00000567049 203 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC104581.2-201ENST00000572227 430 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 MIR3941-201ENST00000582572 103 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC104984.5-201ENST00000586878 94 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AC023043.2-201ENST00000589678 1026 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL359757.2-201ENST00000624309 274 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 AL450472.1-202ENST00000637286 180 ntBASIC1.74□□□□□ -2.13
TRIM49D1C9J1S8 MTND4P23-201ENST00000447723 1363 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.48-201ENST00000362710 103 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.70-201ENST00000362886 110 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 SNORD32A-201ENST00000364805 84 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 RNA5SP125-201ENST00000364843 120 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-43P-201ENST00000384302 107 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.530-201ENST00000384587 101 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-748P-201ENST00000384648 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms