Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
TRAV12-1A0A0B4J245 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU6-552P-201ENST00000362869 119 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU1-17P-201ENST00000363022 152 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU6-45P-201ENST00000384471 107 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 SNORD12-201ENST00000391002 90 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RPL21P1-201ENST00000399532 476 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RPS26P5-201ENST00000418544 335 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 RPS27AP14-201ENST00000422868 454 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AL133396.1-201ENST00000432048 687 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC073614.1-201ENST00000438690 650 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AP003181.2-201ENST00000528941 181 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AL590705.4-201ENST00000532209 134 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC025423.5-201ENST00000550230 219 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AL121579.1-201ENST00000555129 305 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 TPRKBP2-201ENST00000565969 475 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 CYP4A27P-201ENST00000567218 190 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 TMF1P1-201ENST00000576058 373 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC009977.1-201ENST00000586015 570 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AL929325.1-201ENST00000603096 117 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC016727.2-201ENST00000603988 621 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC069431.2-201ENST00000604149 1099 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 Z98751.3-201ENST00000604447 521 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC105148.1-201ENST00000604961 409 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AC009509.4-201ENST00000619202 509 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 MIR6852-201ENST00000621699 66 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 AL450472.1-202ENST00000637286 180 ntBASIC0.42□□□□□ -2.34
TRAV12-1A0A0B4J245 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 RNA5SP361-201ENST00000362686 118 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU6-533P-201ENST00000384144 107 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 MIR200A-201ENST00000384875 90 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 RNA5SP109-201ENST00000391010 116 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU6-1054P-201ENST00000411293 104 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 RNU6-387P-201ENST00000411331 105 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 MTCO2P21-201ENST00000419780 677 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 ELOCP4-201ENST00000420090 333 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 HSFY7P-201ENST00000432672 318 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 HSFY8P-201ENST00000437934 318 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AL133217.1-201ENST00000450980 425 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 snoU13.15-201ENST00000459407 104 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC092991.1-201ENST00000477176 376 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 RAP1BP2-201ENST00000478270 544 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 ARL2BPP4-201ENST00000506854 471 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC112206.4-201ENST00000515142 405 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 SNORD79.1-201ENST00000516069 84 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC109479.2-201ENST00000517842 174 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC023050.3-201ENST00000541142 333 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 MIR5695-201ENST00000579717 85 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 VN1R107P-201ENST00000601784 209 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AL590095.2-201ENST00000604136 117 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AC009994.1-201ENST00000606889 253 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 AL607023.1-201ENST00000620045 248 ntBASIC0.41□□□□□ -2.34
TRAV12-1A0A0B4J245 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
TRAV12-1A0A0B4J245 snoU2-30.2-201ENST00000362805 70 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-179P-201ENST00000363350 107 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-660P-201ENST00000364566 109 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-157P-201ENST00000383957 107 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-116P-201ENST00000384042 109 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 Y_RNA.576-201ENST00000384781 102 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 MIR208B-201ENST00000401172 77 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 MIR1289-2-201ENST00000408360 111 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC002486.1-201ENST00000435098 391 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 Z73417.1-201ENST00000447373 778 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC013470.1-201ENST00000453438 462 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC016632.1-201ENST00000503994 196 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC098799.1-201ENST00000504752 800 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC034244.1-201ENST00000507687 207 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU2-34P-201ENST00000516534 121 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-922P-201ENST00000516753 99 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AP000873.5-201ENST00000533906 236 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AL356157.2-201ENST00000605122 111 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AL031775.1-201ENST00000607014 887 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 MIR6835-201ENST00000621552 64 ntBASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
TRAV12-1A0A0B4J245 AC023934.1-201ENST00000574529 2389 ntBASIC0.39□□□□□ -2.35
TRAV12-1A0A0B4J245 RNU6-1303P-201ENST00000364841 107 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms