Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 USP9YP14-201ENST00000430663 563 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 MTND4LP16-201ENST00000440828 295 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AC067942.3-201ENST00000512025 362 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-276P-201ENST00000516114 96 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 RN7SKP49-201ENST00000516675 260 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 MTATP6P15-201ENST00000527233 835 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AC087883.1-201ENST00000551882 391 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 CYP4A27P-201ENST00000567218 190 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 BNIP3P16-201ENST00000589779 534 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 MTND3P19-201ENST00000603825 345 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 AC068647.2-201ENST00000637380 353 ntBASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TRAV3A0A0B4J244 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-43P-201ENST00000384302 107 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MIR608-201ENST00000384820 100 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC114491.1-201ENST00000416095 246 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 HIGD1AP15-201ENST00000416198 280 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC073910.1-201ENST00000445047 438 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC013470.1-201ENST00000453438 462 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MTCO2P29-201ENST00000465212 189 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AP000797.1-201ENST00000478870 387 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MTND2P31-201ENST00000512602 616 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 SNORA19.3-201ENST00000516165 130 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 RNA5SP384-201ENST00000516615 116 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-197P-201ENST00000516680 100 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-1098P-201ENST00000516772 96 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 SNORA70.22-201ENST00000517160 124 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC022616.6-201ENST00000520479 119 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AP002453.2-201ENST00000533503 320 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MIR4709-201ENST00000577272 72 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MIR5692A1-201ENST00000580523 69 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC008521.1-201ENST00000587471 187 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC110760.3-201ENST00000598794 467 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC064872.1-201ENST00000604823 1072 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC121334.2-201ENST00000605387 271 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AL158211.2-201ENST00000607282 395 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 PCGEM1.1-201ENST00000613431 131 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC022709.1-201ENST00000615967 87 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 AC008147.4-201ENST00000617570 1204 ntBASIC0.5□□□□□ -2.33
TRAV3A0A0B4J244 MTND4P14-201ENST00000435799 1354 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 SNORD56.2-201ENST00000363242 71 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-527P-201ENST00000363425 104 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 RNU5E-10P-201ENST00000363506 118 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 U3.9-201ENST00000363823 204 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 SNORD32A-201ENST00000364805 84 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 SNORD114-24-201ENST00000365029 72 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 SNORA4.2-201ENST00000365313 147 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-331P-201ENST00000384724 107 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 COX6CP10-201ENST00000416832 224 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AC244670.1-201ENST00000436879 112 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-322P-201ENST00000516010 103 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 RNA5SP337-201ENST00000517007 109 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 RNU6-685P-201ENST00000517088 95 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AC136628.3-201ENST00000521868 290 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AC109446.1-201ENST00000566172 220 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AL158032.1-201ENST00000605401 106 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AC080013.3-201ENST00000606839 578 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 AC005520.5-201ENST00000613926 164 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 MIR338-201ENST00000636369 67 ntBASIC0.49□□□□□ -2.33
TRAV3A0A0B4J244 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 RNU4-79P-201ENST00000362764 141 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 Y_RNA.97-201ENST00000363094 102 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 U3.4-201ENST00000363352 213 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 RNU4-92P-201ENST00000363783 136 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 SNORA72.2-201ENST00000365028 127 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 MIR598-201ENST00000384868 97 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 MIR200A-201ENST00000384875 90 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC060773.1-201ENST00000421698 310 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 RPL23AP95-201ENST00000426806 265 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 CALM2P2-201ENST00000428512 440 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AL133396.1-201ENST00000432048 687 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 AC105185.1-201ENST00000518705 535 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 EIF4A1P12-201ENST00000551910 141 ntBASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV3A0A0B4J244 MIR3923-201ENST00000579521 83 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms