Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 RNU6-1115P-201ENST00000362490 106 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.112-201ENST00000363250 102 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.132-201ENST00000363421 102 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 RNU1-101P-201ENST00000391171 127 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AL356057.3-201ENST00000402607 340 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 RPL17P19-201ENST00000489069 552 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 RN7SKP282-201ENST00000516824 299 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 SNORD59.2-201ENST00000516873 68 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.711-201ENST00000516993 102 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 SNORD116.3-201ENST00000517176 78 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 ELOCP31-201ENST00000540463 467 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AC025281.1-201ENST00000567026 265 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AP001836.1-201ENST00000604675 523 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 PART1_1.1-201ENST00000611761 217 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AC040896.1-201ENST00000613819 479 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 MIR6817-201ENST00000615588 66 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AL353997.5-201ENST00000618886 171 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 ZNF299P-201ENST00000406845 1804 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
RAI2Q9Y5P3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 RNY1P16-201ENST00000363063 111 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AC023141.4-201ENST00000412031 328 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AC099799.1-201ENST00000439809 192 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AL137792.2-201ENST00000443484 235 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AL035666.1-201ENST00000446195 348 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 RPL23AP70-201ENST00000483361 460 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 CKS1BP2-201ENST00000497342 240 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 RNA5SP148-201ENST00000516527 94 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 RNU6-699P-201ENST00000517081 110 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 RN7SKP295-201ENST00000517264 153 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 MIR4635-201ENST00000583759 79 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AC083806.3-201ENST00000614016 455 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 AC010889.1-201ENST00000566193 2666 ntBASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RAI2Q9Y5P3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.216-201ENST00000364205 93 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC117470.1-201ENST00000381974 330 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 SNORA22B-201ENST00000383876 138 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 RNU6-843P-201ENST00000384454 104 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 RNU6-692P-201ENST00000384496 107 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 RNU6-748P-201ENST00000384648 107 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 MIR544A-201ENST00000384855 91 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 RNU6-700P-201ENST00000391043 107 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 snosnR66.1-201ENST00000391095 99 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 SAR1AP2-201ENST00000392696 594 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC243964.1-201ENST00000441814 261 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC022447.4-201ENST00000504053 364 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC022432.1-201ENST00000595739 310 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AL133393.1-201ENST00000603277 287 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 AC006157.1-201ENST00000611750 366 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 MTND5P30-201ENST00000452896 1731 ntBASIC2.68□□□□□ -1.98
RAI2Q9Y5P3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.252-201ENST00000364556 101 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 SNORA14A-201ENST00000364773 135 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 RNU6-639P-201ENST00000384074 107 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 RNU6-750P-201ENST00000390946 107 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 AC138623.1-201ENST00000418060 216 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.67□□□□□ -1.98
RAI2Q9Y5P3 AC007098.1-201ENST00000420122 367 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 562.3 ms