Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA13Q9Y5I0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA13Q9Y5I0 AC099654.7-201ENST00000635788 2127 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AL359854.1-201ENST00000614203 1594 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.106-201ENST00000363189 100 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.133-201ENST00000363428 110 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-525P-201ENST00000363685 104 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 SNORD115-8-201ENST00000363856 82 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 SNORD115-38-201ENST00000365037 82 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 MIR181A2-201ENST00000384863 110 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 MIR32-201ENST00000384965 70 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 SNORD88.1-201ENST00000408684 91 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC114482.1-201ENST00000418010 247 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AL590135.1-201ENST00000422215 156 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC019205.3-201ENST00000424573 156 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC016700.2-201ENST00000446011 156 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 RNU7-169P-201ENST00000459456 61 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC117440.1-201ENST00000474107 571 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC090525.1-201ENST00000479116 478 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 HMGB1P35-201ENST00000503360 598 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 RNA5SP76-201ENST00000516277 87 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC090617.3-201ENST00000573670 475 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC090115.4-201ENST00000609970 188 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC107871.2-201ENST00000612894 502 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AL078596.1-201ENST00000624856 447 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
PCDHA13Q9Y5I0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 U3.13-201ENST00000364804 214 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA36A-201ENST00000384221 132 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 U8.10-201ENST00000384260 133 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA54-201ENST00000384281 123 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RNU1-57P-201ENST00000384491 166 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-1105P-201ENST00000384774 107 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 MIR491-201ENST00000384877 84 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC097463.2-201ENST00000421074 142 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 MTND3P2-201ENST00000438452 342 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 TOMM22P6-201ENST00000465035 409 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RPL31P41-201ENST00000477967 372 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA31.6-201ENST00000516241 130 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-1046P-201ENST00000516538 107 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC040926.1-201ENST00000530195 238 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 MIR5680-201ENST00000577577 84 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC011471.1-201ENST00000585766 187 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC005520.5-201ENST00000613926 164 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC008121.3-201ENST00000618726 433 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 SNORD98-201ENST00000636377 67 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-212P-201ENST00000362642 104 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 RNU4-56P-201ENST00000364700 142 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.358-201ENST00000365491 99 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA63.7-201ENST00000365579 123 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 RNVU1-14-201ENST00000384770 164 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 MIR186-201ENST00000384988 86 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 MIR548F4-201ENST00000408515 105 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 MIR1252-201ENST00000408861 65 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC005326.1-201ENST00000429197 123 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC112771.1-201ENST00000463581 102 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA31.16-201ENST00000516773 139 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 CYP4A27P-201ENST00000567218 190 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 MIR5195-201ENST00000583555 115 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms