Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 RNU6-56P-201ENST00000516986 93 ntBASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 AC034114.1-201ENST00000520293 285 ntBASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 CYCSP39-201ENST00000565821 309 ntBASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 FTX_3.1-201ENST00000610451 147 ntBASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 AC243829.7-201ENST00000633081 225 ntBASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDP1Q9Y5B0 Z75746.1-201ENST00000440243 2080 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU1-76P-201ENST00000362903 159 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU6-527P-201ENST00000363425 104 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU1-105P-201ENST00000363470 161 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 U3.13-201ENST00000364804 214 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.350-201ENST00000365409 98 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.405-201ENST00000383979 100 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.451-201ENST00000384200 100 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU6-708P-201ENST00000384217 107 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU6-198P-201ENST00000384258 104 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.483-201ENST00000384380 101 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.524-201ENST00000384564 100 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.561-201ENST00000384694 100 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 SNORA12.2-201ENST00000391040 156 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC125238.1-201ENST00000448842 249 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 SNORD127-201ENST00000458892 86 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU7-87P-201ENST00000459343 62 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RPL23AP49-201ENST00000492925 468 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU7-175P-201ENST00000515915 61 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 Y_RNA.706-201ENST00000516933 99 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 RNU6-703P-201ENST00000516946 107 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AP004607.1-201ENST00000524456 203 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 LINC00933-203ENST00000559812 219 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC104581.2-201ENST00000572227 430 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 MIR4506-201ENST00000584693 77 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC010620.2-201ENST00000600135 313 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 AC078938.1-201ENST00000620993 318 ntBASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDP1Q9Y5B0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CTDP1Q9Y5B0 AP000560.1-201ENST00000624150 1937 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-105P-201ENST00000363909 104 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 SNORA80A-201ENST00000363922 136 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.358-201ENST00000365491 99 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-217P-201ENST00000384164 104 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.552-201ENST00000384665 112 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 MIR887-201ENST00000401258 79 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 RPL23AP22-201ENST00000437556 453 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 RPEP5-201ENST00000441137 268 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 MTATP6P7-201ENST00000453315 681 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 MIR6852-201ENST00000621699 66 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 AC110079.1-202ENST00000635213 138 ntBASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTDP1Q9Y5B0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.27-201ENST00000362540 103 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-898P-201ENST00000365627 104 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 Z98749.2-208ENST00000381646 500 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-611P-201ENST00000384276 104 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RNU2-38P-201ENST00000410856 79 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RNA5SP492-201ENST00000411330 114 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 AP000275.1-201ENST00000411943 390 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RPL37P4-201ENST00000448908 268 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RAC1P5-201ENST00000512182 576 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 RNA5SP217-201ENST00000515959 91 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 SNORA43.2-201ENST00000516652 128 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 AP003733.2-201ENST00000529409 171 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 AC097372.5-201ENST00000623665 376 ntBASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTDP1Q9Y5B0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC009541.1-201ENST00000438279 2662 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.183-201ENST00000363882 113 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 SNORA54-201ENST00000384281 123 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.500-201ENST00000384466 111 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms