Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR653-201ENST00000385279 96 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 MIR1287-201ENST00000408492 90 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AL162725.1-201ENST00000435405 301 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 RPL37P21-201ENST00000435890 276 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AC022364.2-201ENST00000457963 554 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AC023538.1-201ENST00000534576 736 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AC010620.1-201ENST00000601088 1102 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 AC008147.4-201ENST00000617570 1204 ntBASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
AP4S1Q9Y587 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RNU6-302P-201ENST00000365249 107 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RNU6V-201ENST00000384105 107 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RNU6-514P-201ENST00000384208 107 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 MIR193B-201ENST00000384907 83 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AL603865.2-201ENST00000401679 213 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RNA5SP504-201ENST00000410676 117 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RPL21P24-201ENST00000413752 448 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 MTCYBP10-201ENST00000424905 650 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AC002486.1-201ENST00000435098 391 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AC092427.1-201ENST00000439177 601 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AC109810.1-201ENST00000534066 224 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 SNRPGP1-201ENST00000553864 222 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AC023827.1-201ENST00000569247 97 ntBASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.39□□□□□ -2.47
AP4S1Q9Y587 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 SNORD65C-201ENST00000390962 71 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AL359634.1-202ENST00000404721 284 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 MTCO2P34-201ENST00000421994 607 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC245047.8-201ENST00000456455 284 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 MTCO2P18-201ENST00000457151 658 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC023157.2-201ENST00000540596 141 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC141557.1-201ENST00000540982 400 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 MIR3124-201ENST00000582636 67 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AP001033.2-201ENST00000609701 1003 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC092634.7-201ENST00000621022 103 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 AC073544.1-201ENST00000600110 1595 ntBASIC-0.4□□□□□ -2.47
AP4S1Q9Y587 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RNU6-438P-201ENST00000365561 103 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 SNORA32.2-201ENST00000384049 122 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RNU6-793P-201ENST00000384233 104 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RNY1P4-201ENST00000384595 115 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RPS3AP36-201ENST00000398190 775 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 VPS26BP1-201ENST00000417155 755 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 DPRXP1-201ENST00000426312 460 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 SEPT7P5-201ENST00000434048 306 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 TPTE2P1-204ENST00000435256 593 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 SEPT7P4-201ENST00000437076 306 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RPL23AP54-201ENST00000495129 419 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 RNU6-760P-201ENST00000516078 97 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 AC243773.3-201ENST00000613270 256 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 AC107905.1-201ENST00000616204 426 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 AL445264.1-201ENST00000621719 171 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 FCF1P10-201ENST00000407590 479 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 MTCO1P57-201ENST00000432182 261 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 AC010531.2-201ENST00000465012 153 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 RPS3AP17-201ENST00000472594 777 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 RNU1-86P-201ENST00000516108 154 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 RNU1-107P-201ENST00000516617 154 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 RNU6-143P-201ENST00000516942 93 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 SUB1P2-201ENST00000556401 297 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 AC092325.1-201ENST00000566449 554 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 AL357080.1-201ENST00000617394 239 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 AC253576.2-201ENST00000618815 580 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 AL078595.3-201ENST00000623815 1166 ntBASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.42□□□□□ -2.48
AP4S1Q9Y587 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 RNY1-201ENST00000364228 113 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 RNA5SP128-201ENST00000365305 116 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 SNORD105-201ENST00000386910 85 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AC060773.1-201ENST00000421698 310 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms