Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VPS4AQ9UN37 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS4AQ9UN37 AC002543.1-201ENST00000299783 1954 ntBASIC2.87□□□□□ -1.95
VPS4AQ9UN37 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS4AQ9UN37 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AC138915.1-201ENST00000565427 1685 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 RNU5B-2P-201ENST00000363036 113 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 Y_RNA.428-201ENST00000384078 102 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AL512633.1-201ENST00000399931 655 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 MTCYBP2-201ENST00000407745 171 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 RNU2-23P-201ENST00000410545 195 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AL358453.1-201ENST00000422522 250 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AL353997.1-201ENST00000432936 108 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 RPL23AP50-201ENST00000434149 455 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 RPL39P29-201ENST00000447779 157 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 RN7SKP210-201ENST00000459176 261 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AC107626.1-201ENST00000471084 183 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 RAC1P5-201ENST00000512182 576 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AC091826.1-201ENST00000514065 313 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 SNORD116.3-201ENST00000517176 78 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 MRPS36P4-201ENST00000534436 298 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 PART1_1.1-201ENST00000611761 217 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AC007485.1-201ENST00000616755 206 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 SCARNA4-201ENST00000629045 128 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
VPS4AQ9UN37 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS4AQ9UN37 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS4AQ9UN37 Y_RNA.162-201ENST00000363683 102 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RNU6-99P-201ENST00000364721 107 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RNU6-1160P-201ENST00000384546 104 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 MIR767-201ENST00000390228 109 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 MIR1261-201ENST00000408659 82 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RNU6-1156P-201ENST00000410365 100 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RNA5SP184-201ENST00000411071 108 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 MTCYBP10-201ENST00000424905 650 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 GSTA11P-201ENST00000452866 669 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RPL30P1-201ENST00000488676 339 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RPL23AP75-201ENST00000491601 451 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AC104564.1-201ENST00000493028 407 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RNU4-77P-201ENST00000516692 156 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AL590705.4-201ENST00000532209 134 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AC010928.2-201ENST00000588017 287 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AC016925.2-201ENST00000605108 242 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 RPL23AP88-201ENST00000605759 454 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AL355802.3-201ENST00000607571 545 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
VPS4AQ9UN37 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS4AQ9UN37 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VPS4AQ9UN37 AC073325.2-201ENST00000339545 159 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC117470.1-201ENST00000381974 330 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 SNORA29-201ENST00000384183 140 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 MIR606-201ENST00000384851 96 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 SNORA12.2-201ENST00000391040 156 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC244670.1-201ENST00000436879 112 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS4AQ9UN37 EEF1B2P7-201ENST00000451177 676 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AL441985.1-201ENST00000457727 251 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 GZMAP1-201ENST00000503054 631 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC016632.1-201ENST00000503994 196 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 SNORA25.10-201ENST00000515926 124 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 RNU6-475P-201ENST00000516073 104 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 SNORA31.6-201ENST00000516241 130 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC023442.1-201ENST00000531247 422 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC079598.5-201ENST00000547460 117 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS4AQ9UN37 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC096772.1-201ENST00000609146 564 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC040896.1-201ENST00000613819 479 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC083806.3-201ENST00000614016 455 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC087588.2-201ENST00000617667 426 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AC007792.1-201ENST00000623023 402 ntBASIC2.84□□□□□ -1.95
VPS4AQ9UN37 AL109809.4-201ENST00000603520 2185 ntBASIC2.84□□□□□ -1.96
VPS4AQ9UN37 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VPS4AQ9UN37 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS4AQ9UN37 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS4AQ9UN37 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS4AQ9UN37 AC233981.2-201ENST00000611524 1614 ntBASIC2.83□□□□□ -1.96
VPS4AQ9UN37 AC092268.1-201ENST00000342691 405 ntBASIC2.83□□□□□ -1.96
VPS4AQ9UN37 MIR22-201ENST00000362190 85 ntBASIC2.83□□□□□ -1.96
VPS4AQ9UN37 RNU4-82P-201ENST00000362443 140 ntBASIC2.83□□□□□ -1.96
VPS4AQ9UN37 Y_RNA.80-201ENST00000362996 102 ntBASIC2.83□□□□□ -1.96
VPS4AQ9UN37 Y_RNA.158-201ENST00000363651 101 ntBASIC2.83□□□□□ -1.96
VPS4AQ9UN37 SNORD115-32-201ENST00000364079 82 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms