Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 Y_RNA.533-201ENST00000384596 114 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 RNA5SP354-201ENST00000391247 136 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 AL133475.1-201ENST00000404414 305 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.56□□□□□ -2
SIX4Q9UIU6 PTGES3P4-201ENST00000426243 356 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.56□□□□□ -2
SIX4Q9UIU6 SNORD19.2-201ENST00000516978 73 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 AC021269.2-201ENST00000532318 330 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.56□□□□□ -2
SIX4Q9UIU6 AC025281.1-201ENST00000567026 265 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.56□□□□□ -2
SIX4Q9UIU6 MIR3171-201ENST00000584270 74 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.56□□□□□ -2
SIX4Q9UIU6 VN1R107P-201ENST00000601784 209 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.56□□□□□ -2
SIX4Q9UIU6 uc_338.22-201ENST00000622722 187 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
SIX4Q9UIU6 MTND5P30-201ENST00000452896 1731 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.56□□□□□ -2
SIX4Q9UIU6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.56□□□□□ -2
SIX4Q9UIU6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SIX4Q9UIU6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SIX4Q9UIU6 SNORD50.1-201ENST00000362987 71 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 Y_RNA.123-201ENST00000363338 102 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RNU6-843P-201ENST00000384454 104 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RNU6-19P-201ENST00000384718 107 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 MIR767-201ENST00000390228 109 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
SIX4Q9UIU6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.55□□□□□ -2
SIX4Q9UIU6 AL591034.2-201ENST00000402839 359 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AP000275.1-201ENST00000411943 390 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC009414.1-201ENST00000427200 443 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AL353997.1-201ENST00000432936 108 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RPL23AP50-201ENST00000434149 455 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC004383.1-201ENST00000438135 289 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AL137792.2-201ENST00000443484 235 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AL031659.1-201ENST00000447075 539 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 Y_RNA.631-201ENST00000459607 101 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RPS27P26-201ENST00000494583 239 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC114801.2-201ENST00000503825 781 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC022447.4-201ENST00000504053 364 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC022493.2-201ENST00000506122 481 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC091874.1-201ENST00000511402 339 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.55□□□□□ -2
SIX4Q9UIU6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 RN7SKP40-201ENST00000517211 242 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.55□□□□□ -2
SIX4Q9UIU6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.55□□□□□ -2
SIX4Q9UIU6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.55□□□□□ -2
SIX4Q9UIU6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.55□□□□□ -2
SIX4Q9UIU6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.55□□□□□ -2
SIX4Q9UIU6 MIR4513-201ENST00000581077 86 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 MIR4273-201ENST00000582824 84 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.55□□□□□ -2
SIX4Q9UIU6 SNRPGP17-201ENST00000603780 214 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AC005014.2-201ENST00000607795 599 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.55□□□□□ -2
SIX4Q9UIU6 MIR3529-201ENST00000637713 78 ntBASIC2.55□□□□□ -2
SIX4Q9UIU6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SIX4Q9UIU6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.54□□□□□ -2
SIX4Q9UIU6 Y_RNA.5-201ENST00000362334 102 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 Y_RNA.128-201ENST00000363391 112 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 SNORA63-201ENST00000363450 132 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 Y_RNA.326-201ENST00000365176 113 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 Y_RNA.463-201ENST00000384271 102 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AC096649.2-201ENST00000416186 393 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AC124916.1-201ENST00000444020 547 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.54□□□□□ -2
SIX4Q9UIU6 AC079354.2-201ENST00000453523 154 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.54□□□□□ -2
SIX4Q9UIU6 RNU6-470P-201ENST00000515954 104 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AC022432.1-201ENST00000595739 310 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 CYP2C61P-201ENST00000604072 290 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 AC024581.2-201ENST00000619986 252 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.54□□□□□ -2
SIX4Q9UIU6 MTND5P9-201ENST00000503854 1755 ntBASIC2.54□□□□□ -2
SIX4Q9UIU6 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 SNORD32A-201ENST00000364805 84 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 RNU6-622P-201ENST00000384272 103 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 MIR544A-201ENST00000384855 91 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.53□□□□□ -2
SIX4Q9UIU6 PMCHL1-202ENST00000423102 261 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AC107626.1-201ENST00000471084 183 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 AIG1P1-201ENST00000503376 148 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 SMURF2P1-201ENST00000514992 481 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 SCARNA15.1-201ENST00000516384 125 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 Y_RNA.711-201ENST00000516993 102 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 RNU6-699P-201ENST00000517081 110 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 SNRPGP18-201ENST00000553000 214 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms