Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AC040926.1-201ENST00000530195 238 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AL161670.1-201ENST00000554348 137 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AC006006.1-201ENST00000603082 144 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AL356157.2-201ENST00000605122 111 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 MIR1244-1-201ENST00000612829 85 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 AC007792.1-201ENST00000623023 402 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 MIR1244-3-201ENST00000635744 85 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 MIR1244-2-201ENST00000636449 85 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 MIR1244-4-202ENST00000636813 85 ntBASIC3.11□□□□□ -1.91
DKK3Q9UBP4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
DKK3Q9UBP4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.193-201ENST00000363979 102 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 RNU6-450P-201ENST00000364654 107 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.276-201ENST00000364732 109 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 SNORA69.1-201ENST00000390904 137 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 RNA5SP494-201ENST00000410653 129 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AL731563.1-201ENST00000442202 214 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC009296.1-201ENST00000443146 155 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC073910.1-201ENST00000445047 438 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AL513124.1-201ENST00000450410 614 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 RNU6-635P-201ENST00000516651 102 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC006600.1-201ENST00000572529 153 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC060766.3-201ENST00000591442 263 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 U2.1-201ENST00000618978 145 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC243829.7-201ENST00000633081 225 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC241585.2-209ENST00000638217 143 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DKK3Q9UBP4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DKK3Q9UBP4 AC110491.1-201ENST00000562191 2010 ntBASIC3.1□□□□□ -1.91
DKK3Q9UBP4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 RNU6-198P-201ENST00000384258 104 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.551-201ENST00000384661 102 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 MT-TG-201ENST00000387429 68 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 HMGN2P35-201ENST00000412164 270 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC092423.1-201ENST00000430165 186 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC243964.1-201ENST00000441814 261 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 MRPS35P2-201ENST00000508242 191 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 AC107871.2-201ENST00000612894 502 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.09□□□□□ -1.91
DKK3Q9UBP4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
DKK3Q9UBP4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.09□□□□□ -1.92
DKK3Q9UBP4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
DKK3Q9UBP4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DKK3Q9UBP4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DKK3Q9UBP4 MIR449A-201ENST00000362113 91 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 RNU6-702P-201ENST00000364982 107 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 SNORA12.2-201ENST00000391040 156 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
DKK3Q9UBP4 AC074117.2-201ENST00000417130 397 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.08□□□□□ -1.92
DKK3Q9UBP4 AC093732.2-201ENST00000607950 274 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 AC024581.2-201ENST00000619986 252 ntBASIC3.08□□□□□ -1.92
DKK3Q9UBP4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DKK3Q9UBP4 AC093831.2-201ENST00000624393 3427 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 RNY3P11-201ENST00000364153 102 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 SNORD116-20-201ENST00000384529 92 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 MIR190B-201ENST00000401119 79 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 FTH1P15-201ENST00000406984 280 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 RPL23AP95-201ENST00000426806 265 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms