Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-48P-201ENST00000384161 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-16P-201ENST00000384385 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-15P-201ENST00000384534 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNU6-29P-201ENST00000384637 107 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 MIR10A-201ENST00000385043 110 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNA5SP100-201ENST00000410903 110 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RNA5SP59-201ENST00000410922 110 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC119618.1-201ENST00000434191 222 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC243964.1-201ENST00000441814 261 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC88CQ9P219 RPL21P5-201ENST00000554662 472 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC090517.1-201ENST00000569307 266 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC137800.2-201ENST00000574375 120 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC022960.3-201ENST00000619794 441 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 AC079248.2-201ENST00000623779 326 ntBASIC0.82□□□□□ -2.28
CCDC88CQ9P219 SNORD33-201ENST00000362761 85 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 RNU6-1106P-201ENST00000390845 107 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 Y_RNA.598-201ENST00000410480 95 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 RPL23AP95-201ENST00000426806 265 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 CBX3P6-201ENST00000430257 527 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MTCYBP39-201ENST00000437562 491 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC010486.2-201ENST00000505572 483 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 COPS8P3-201ENST00000526024 482 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MIR3913-1-201ENST00000577744 102 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC091135.1-201ENST00000585943 307 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC018889.1-201ENST00000605372 397 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MIR98-201ENST00000606724 119 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL050303.3-201ENST00000613704 284 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC099654.13-201ENST00000639774 207 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 RNU6-181P-201ENST00000363225 107 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 U3.4-201ENST00000363352 213 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 Y_RNA.205-201ENST00000364128 113 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MIR544A-201ENST00000384855 91 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 EBAG9P1-201ENST00000418955 543 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MRPL35P3-201ENST00000421557 364 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MED13P1-201ENST00000428342 171 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL591043.1-201ENST00000432461 424 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 MTND1P30-201ENST00000441241 901 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL033528.1-201ENST00000453780 140 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC011005.2-201ENST00000487324 359 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC021146.2-201ENST00000504736 556 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC105417.1-201ENST00000514691 285 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 RNU6-445P-201ENST00000516949 107 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 RNU6-685P-201ENST00000517088 95 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 BNIP3P6-201ENST00000549284 499 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC016727.2-201ENST00000603988 621 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AP000860.1-201ENST00000605250 559 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC027449.1-201ENST00000608890 407 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC009159.2-201ENST00000617603 606 ntBASIC0.81□□□□□ -2.28
CCDC88CQ9P219 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CCDC88CQ9P219 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 Y_RNA.99-201ENST00000363138 105 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 RNU6-1285P-201ENST00000363480 105 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 RNA5SP325-201ENST00000363756 130 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 RNU6-105P-201ENST00000363909 104 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 Z99497.1-201ENST00000421282 135 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC009961.2-201ENST00000435771 251 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AL445567.1-201ENST00000439121 144 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC114801.2-201ENST00000503825 781 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC079140.5-201ENST00000507882 310 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 MTND3P25-201ENST00000509243 135 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC025465.3-201ENST00000510570 311 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 RNU6-311P-201ENST00000516224 102 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 CYCSP23-201ENST00000519781 313 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC109446.1-201ENST00000566172 220 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms